Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF253O75346 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF253O75346 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF253O75346 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF253O75346 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 AC080038.3-201ENST00000623346 1952 ntBASIC16.73■□□□□ 0.27
ZNF253O75346 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF253O75346 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF253O75346 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF253O75346 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF253O75346 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF253O75346 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF253O75346 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ZNF253O75346 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ZNF253O75346 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF253O75346 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF253O75346 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ZNF253O75346 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF253O75346 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ZNF253O75346 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ZNF253O75346 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF253O75346 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.72■□□□□ 0.27
ZNF253O75346 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF253O75346 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF253O75346 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF253O75346 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF253O75346 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF253O75346 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF253O75346 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.71■□□□□ 0.27
ZNF253O75346 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF253O75346 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
ZNF253O75346 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 AC021242.3-201ENST00000607598 1377 ntBASIC16.71■□□□□ 0.27
ZNF253O75346 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ZNF253O75346 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF253O75346 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZNF253O75346 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.71■□□□□ 0.26
ZNF253O75346 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.71■□□□□ 0.26
ZNF253O75346 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ZNF253O75346 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ZNF253O75346 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 AC026310.3-201ENST00000625186 2373 ntBASIC16.7■□□□□ 0.26
ZNF253O75346 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ZNF253O75346 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ZNF253O75346 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF253O75346 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.7■□□□□ 0.26
ZNF253O75346 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.7■□□□□ 0.26
ZNF253O75346 AL031848.2-201ENST00000607670 837 ntBASIC16.7■□□□□ 0.26
ZNF253O75346 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ZNF253O75346 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF253O75346 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF253O75346 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.7■□□□□ 0.26
ZNF253O75346 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF253O75346 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF253O75346 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ZNF253O75346 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF253O75346 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF253O75346 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
ZNF253O75346 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF253O75346 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 LINC01960-201ENST00000563759 1884 ntBASIC16.69■□□□□ 0.26
ZNF253O75346 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF253O75346 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ZNF253O75346 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ZNF253O75346 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms