Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT3O75175 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CNOT3O75175 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CNOT3O75175 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CNOT3O75175 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT3O75175 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT3O75175 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNOT3O75175 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.82■□□□□ 0.92
CNOT3O75175 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT3O75175 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNOT3O75175 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT3O75175 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNOT3O75175 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT3O75175 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT3O75175 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT3O75175 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.82■□□□□ 0.92
CNOT3O75175 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CNOT3O75175 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.82■□□□□ 0.92
CNOT3O75175 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.82■□□□□ 0.92
CNOT3O75175 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.82■□□□□ 0.92
CNOT3O75175 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT3O75175 AL353803.4-201ENST00000565882 1934 ntBASIC20.82■□□□□ 0.92
CNOT3O75175 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNOT3O75175 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CNOT3O75175 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CNOT3O75175 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT3O75175 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT3O75175 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT3O75175 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.81■□□□□ 0.92
CNOT3O75175 AC092666.2-201ENST00000613287 246 ntBASIC20.81■□□□□ 0.92
CNOT3O75175 AL031602.1-201ENST00000633169 911 ntBASIC20.81■□□□□ 0.92
CNOT3O75175 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT3O75175 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNOT3O75175 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CNOT3O75175 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CNOT3O75175 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 MIR572-201ENST00000384983 95 ntBASIC20.8■□□□□ 0.92
CNOT3O75175 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.8■□□□□ 0.92
CNOT3O75175 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.8■□□□□ 0.92
CNOT3O75175 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNOT3O75175 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.79■□□□□ 0.92
CNOT3O75175 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.79■□□□□ 0.92
CNOT3O75175 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 AL162430.1-201ENST00000480705 870 ntBASIC20.79■□□□□ 0.92
CNOT3O75175 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.79■□□□□ 0.92
CNOT3O75175 MIR6084-201ENST00000622012 110 ntBASIC20.79■□□□□ 0.92
CNOT3O75175 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNOT3O75175 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CNOT3O75175 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNOT3O75175 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT3O75175 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT3O75175 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT3O75175 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CNOT3O75175 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT3O75175 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT3O75175 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT3O75175 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.78■□□□□ 0.92
CNOT3O75175 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.78■□□□□ 0.92
CNOT3O75175 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNOT3O75175 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CNOT3O75175 AC004687.1-201ENST00000579003 1625 ntBASIC20.78■□□□□ 0.92
CNOT3O75175 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.78■□□□□ 0.92
CNOT3O75175 RNF165-205ENST00000588679 2904 ntBASIC20.77■□□□□ 0.92
CNOT3O75175 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.92
CNOT3O75175 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT3O75175 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT3O75175 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.77■□□□□ 0.92
CNOT3O75175 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT3O75175 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.77■□□□□ 0.92
CNOT3O75175 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.77■□□□□ 0.92
CNOT3O75175 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT3O75175 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT3O75175 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CNOT3O75175 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNOT3O75175 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CNOT3O75175 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNOT3O75175 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CNOT3O75175 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CNOT3O75175 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNOT3O75175 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNOT3O75175 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNOT3O75175 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNOT3O75175 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms