Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.32■□□□□ 0.84
PLOD3O60568 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.32■□□□□ 0.84
PLOD3O60568 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PLOD3O60568 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.32■□□□□ 0.84
PLOD3O60568 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
PLOD3O60568 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PLOD3O60568 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PLOD3O60568 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PLOD3O60568 AC010141.3-201ENST00000456659 717 ntBASIC20.31■□□□□ 0.84
PLOD3O60568 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PLOD3O60568 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.31■□□□□ 0.84
PLOD3O60568 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.31■□□□□ 0.84
PLOD3O60568 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PLOD3O60568 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PLOD3O60568 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.31■□□□□ 0.84
PLOD3O60568 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PLOD3O60568 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PLOD3O60568 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PLOD3O60568 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PLOD3O60568 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.3■□□□□ 0.84
PLOD3O60568 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.3■□□□□ 0.84
PLOD3O60568 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 EDA-201ENST00000338901 1233 ntBASIC20.3■□□□□ 0.84
PLOD3O60568 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.3■□□□□ 0.84
PLOD3O60568 AC079089.2-201ENST00000531211 1277 ntBASIC20.3■□□□□ 0.84
PLOD3O60568 AC233992.3-201ENST00000607491 485 ntBASIC20.3■□□□□ 0.84
PLOD3O60568 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PLOD3O60568 EP400NL-214ENST00000641289 2402 ntBASIC20.29■□□□□ 0.84
PLOD3O60568 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
PLOD3O60568 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
PLOD3O60568 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.29■□□□□ 0.84
PLOD3O60568 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.29■□□□□ 0.84
PLOD3O60568 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 AC092053.2-201ENST00000640557 1818 ntBASIC20.29■□□□□ 0.84
PLOD3O60568 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PLOD3O60568 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PLOD3O60568 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PLOD3O60568 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.28■□□□□ 0.84
PLOD3O60568 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.28■□□□□ 0.84
PLOD3O60568 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.28■□□□□ 0.84
PLOD3O60568 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.28■□□□□ 0.84
PLOD3O60568 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 AC133561.4-201ENST00000566112 224 ntBASIC20.28■□□□□ 0.84
PLOD3O60568 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PLOD3O60568 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.28■□□□□ 0.84
PLOD3O60568 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.28■□□□□ 0.84
PLOD3O60568 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PLOD3O60568 OXCT2P1-201ENST00000447263 1535 ntBASIC20.27■□□□□ 0.84
PLOD3O60568 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PLOD3O60568 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.27■□□□□ 0.84
PLOD3O60568 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.27■□□□□ 0.84
PLOD3O60568 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PLOD3O60568 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PLOD3O60568 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PLOD3O60568 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PLOD3O60568 AL024507.2-201ENST00000606070 2574 ntBASIC20.27■□□□□ 0.84
PLOD3O60568 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PLOD3O60568 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PLOD3O60568 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.27■□□□□ 0.84
PLOD3O60568 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.27■□□□□ 0.84
PLOD3O60568 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PLOD3O60568 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.27■□□□□ 0.84
PLOD3O60568 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PLOD3O60568 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
PLOD3O60568 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.27■□□□□ 0.84
PLOD3O60568 AL139246.5-201ENST00000606645 996 ntBASIC20.27■□□□□ 0.84
PLOD3O60568 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PLOD3O60568 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PLOD3O60568 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PLOD3O60568 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PLOD3O60568 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PLOD3O60568 LINC00565-201ENST00000562710 2331 ntBASIC20.26■□□□□ 0.83
PLOD3O60568 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms