Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GDF9O60383 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.26■□□□□ 0.99
GDF9O60383 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GDF9O60383 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GDF9O60383 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
GDF9O60383 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF9O60383 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF9O60383 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
GDF9O60383 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF9O60383 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDF9O60383 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
GDF9O60383 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GDF9O60383 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.24■□□□□ 0.99
GDF9O60383 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
GDF9O60383 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
GDF9O60383 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.24■□□□□ 0.99
GDF9O60383 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.24■□□□□ 0.99
GDF9O60383 AC006058.3-201ENST00000606217 1069 ntBASIC21.24■□□□□ 0.99
GDF9O60383 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.24■□□□□ 0.99
GDF9O60383 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 AC020928.2-201ENST00000588717 2197 ntBASIC21.24■□□□□ 0.99
GDF9O60383 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 AC142381.3-201ENST00000568208 1670 ntBASIC21.24■□□□□ 0.99
GDF9O60383 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
GDF9O60383 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDF9O60383 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.24■□□□□ 0.99
GDF9O60383 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDF9O60383 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.23■□□□□ 0.99
GDF9O60383 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF9O60383 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF9O60383 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
GDF9O60383 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.23■□□□□ 0.99
GDF9O60383 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.23■□□□□ 0.99
GDF9O60383 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF9O60383 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.23■□□□□ 0.99
GDF9O60383 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.23■□□□□ 0.99
GDF9O60383 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF9O60383 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
GDF9O60383 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GDF9O60383 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.22■□□□□ 0.99
GDF9O60383 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GDF9O60383 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.22■□□□□ 0.99
GDF9O60383 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.22■□□□□ 0.99
GDF9O60383 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.22■□□□□ 0.99
GDF9O60383 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.22■□□□□ 0.99
GDF9O60383 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.22■□□□□ 0.99
GDF9O60383 AC083880.1-201ENST00000608266 535 ntBASIC21.22■□□□□ 0.99
GDF9O60383 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF9O60383 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GDF9O60383 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.22■□□□□ 0.99
GDF9O60383 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.21■□□□□ 0.99
GDF9O60383 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.21■□□□□ 0.99
GDF9O60383 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.21■□□□□ 0.99
GDF9O60383 CYP2T1P-201ENST00000432607 1285 ntBASIC21.21■□□□□ 0.99
GDF9O60383 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GDF9O60383 AC128676.1-201ENST00000454392 318 ntBASIC21.21■□□□□ 0.99
GDF9O60383 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 UNC93B4-201ENST00000505679 747 ntBASIC21.21■□□□□ 0.99
GDF9O60383 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 AC092118.2-201ENST00000613495 667 ntBASIC21.21■□□□□ 0.99
GDF9O60383 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF9O60383 AC009237.3-201ENST00000393279 1427 ntBASIC21.21■□□□□ 0.99
GDF9O60383 AC068338.2-201ENST00000563278 1430 ntBASIC21.21■□□□□ 0.99
GDF9O60383 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.2■□□□□ 0.99
GDF9O60383 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF9O60383 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
GDF9O60383 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.2■□□□□ 0.98
GDF9O60383 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF9O60383 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF9O60383 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.2■□□□□ 0.98
GDF9O60383 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.2■□□□□ 0.98
GDF9O60383 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GDF9O60383 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GDF9O60383 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDF9O60383 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF9O60383 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GDF9O60383 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF9O60383 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF9O60383 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.19■□□□□ 0.98
GDF9O60383 AC093787.1-201ENST00000450396 207 ntBASIC21.19■□□□□ 0.98
GDF9O60383 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
GDF9O60383 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.19■□□□□ 0.98
GDF9O60383 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.19■□□□□ 0.98
GDF9O60383 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF9O60383 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.19■□□□□ 0.98
GDF9O60383 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF9O60383 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.18■□□□□ 0.98
GDF9O60383 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.18■□□□□ 0.98
GDF9O60383 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF9O60383 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms