Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA12O60330 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA12O60330 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA12O60330 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGA12O60330 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA12O60330 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA12O60330 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGA12O60330 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA12O60330 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA12O60330 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 NCF1B-203ENST00000435988 1254 ntBASIC21.42■■□□□ 1.02
PCDHGA12O60330 AC004687.1-201ENST00000579003 1625 ntBASIC21.42■■□□□ 1.02
PCDHGA12O60330 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA12O60330 AL109923.1-201ENST00000618799 583 ntBASIC21.42■■□□□ 1.02
PCDHGA12O60330 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA12O60330 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA12O60330 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA12O60330 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA12O60330 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA12O60330 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA12O60330 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PCDHGA12O60330 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 AC011767.1-201ENST00000617410 1153 ntBASIC21.4■■□□□ 1.02
PCDHGA12O60330 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA12O60330 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA12O60330 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA12O60330 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA12O60330 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDHGA12O60330 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGA12O60330 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA12O60330 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA12O60330 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA12O60330 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDHGA12O60330 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHGA12O60330 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA12O60330 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PCDHGA12O60330 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA12O60330 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA12O60330 CLDN5-201ENST00000403084 2357 ntBASIC21.38■■□□□ 1.01
PCDHGA12O60330 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA12O60330 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA12O60330 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA12O60330 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHGA12O60330 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA12O60330 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA12O60330 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA12O60330 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA12O60330 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA12O60330 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA12O60330 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA12O60330 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHGA12O60330 AL355802.2-201ENST00000402069 882 ntBASIC21.37■■□□□ 1.01
PCDHGA12O60330 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 AC079140.4-201ENST00000507448 529 ntBASIC21.37■■□□□ 1.01
PCDHGA12O60330 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PCDHGA12O60330 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.37■■□□□ 1.01
PCDHGA12O60330 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms