Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC006455.2-201ENST00000429931 906 ntBASIC20.73■□□□□ 0.91
SLC28A2O43868 AC012414.1-201ENST00000556676 535 ntBASIC20.73■□□□□ 0.91
SLC28A2O43868 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC28A2O43868 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SLC28A2O43868 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC28A2O43868 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC28A2O43868 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC28A2O43868 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC28A2O43868 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC28A2O43868 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC28A2O43868 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC28A2O43868 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.72■□□□□ 0.91
SLC28A2O43868 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC28A2O43868 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 MIR3181-201ENST00000578512 73 ntBASIC20.72■□□□□ 0.91
SLC28A2O43868 AC009086.3-201ENST00000623486 1008 ntBASIC20.72■□□□□ 0.91
SLC28A2O43868 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC28A2O43868 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC28A2O43868 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC28A2O43868 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC28A2O43868 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 AL354811.1-201ENST00000610286 706 ntBASIC20.71■□□□□ 0.91
SLC28A2O43868 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC28A2O43868 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC28A2O43868 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC28A2O43868 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC28A2O43868 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
SLC28A2O43868 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.7■□□□□ 0.91
SLC28A2O43868 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SLC28A2O43868 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC28A2O43868 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC28A2O43868 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC28A2O43868 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC28A2O43868 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.7■□□□□ 0.9
SLC28A2O43868 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.7■□□□□ 0.9
SLC28A2O43868 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC28A2O43868 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SLC28A2O43868 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC28A2O43868 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC28A2O43868 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 AC016769.1-201ENST00000409132 1010 ntBASIC20.69■□□□□ 0.9
SLC28A2O43868 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.69■□□□□ 0.9
SLC28A2O43868 AL109923.1-201ENST00000618799 583 ntBASIC20.69■□□□□ 0.9
SLC28A2O43868 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC28A2O43868 LINC02228-203ENST00000641970 1355 ntBASIC20.69■□□□□ 0.9
SLC28A2O43868 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC28A2O43868 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC28A2O43868 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SLC28A2O43868 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC28A2O43868 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC28A2O43868 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC28A2O43868 ECEL1P1-201ENST00000373592 1742 ntBASIC20.68■□□□□ 0.9
SLC28A2O43868 LINC01529-204ENST00000636474 1715 ntBASIC20.68■□□□□ 0.9
SLC28A2O43868 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SLC28A2O43868 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC28A2O43868 CD99P1-205ENST00000527459 561 ntBASIC20.68■□□□□ 0.9
SLC28A2O43868 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC28A2O43868 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC28A2O43868 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC28A2O43868 AC073111.5-205ENST00000641717 521 ntBASIC20.68■□□□□ 0.9
SLC28A2O43868 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC28A2O43868 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLC28A2O43868 LINC00526-201ENST00000581067 1875 ntBASIC20.68■□□□□ 0.9
SLC28A2O43868 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms