Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SSNA1O43805 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.38■□□□□ 0.53
SSNA1O43805 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.38■□□□□ 0.53
SSNA1O43805 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.38■□□□□ 0.53
SSNA1O43805 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSNA1O43805 DUX4L11-201ENST00000611504 1267 ntBASIC18.38■□□□□ 0.53
SSNA1O43805 DUX4L12-201ENST00000614593 1267 ntBASIC18.38■□□□□ 0.53
SSNA1O43805 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.38■□□□□ 0.53
SSNA1O43805 DUX4L14-201ENST00000621227 1267 ntBASIC18.38■□□□□ 0.53
SSNA1O43805 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SSNA1O43805 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSNA1O43805 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SSNA1O43805 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSNA1O43805 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.38■□□□□ 0.53
SSNA1O43805 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.38■□□□□ 0.53
SSNA1O43805 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.37■□□□□ 0.53
SSNA1O43805 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.37■□□□□ 0.53
SSNA1O43805 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.37■□□□□ 0.53
SSNA1O43805 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSNA1O43805 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSNA1O43805 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SSNA1O43805 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSNA1O43805 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSNA1O43805 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSNA1O43805 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSNA1O43805 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SSNA1O43805 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.36■□□□□ 0.53
SSNA1O43805 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SSNA1O43805 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SSNA1O43805 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.36■□□□□ 0.53
SSNA1O43805 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSNA1O43805 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.35■□□□□ 0.53
SSNA1O43805 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSNA1O43805 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSNA1O43805 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.35■□□□□ 0.53
SSNA1O43805 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SSNA1O43805 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SSNA1O43805 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.35■□□□□ 0.53
SSNA1O43805 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSNA1O43805 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSNA1O43805 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSNA1O43805 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSNA1O43805 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
SSNA1O43805 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.35■□□□□ 0.53
SSNA1O43805 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSNA1O43805 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSNA1O43805 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SSNA1O43805 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SSNA1O43805 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.34■□□□□ 0.53
SSNA1O43805 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSNA1O43805 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 RP9P-202ENST00000450133 1212 ntBASIC18.34■□□□□ 0.53
SSNA1O43805 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSNA1O43805 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSNA1O43805 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.33■□□□□ 0.53
SSNA1O43805 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSNA1O43805 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.33■□□□□ 0.53
SSNA1O43805 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSNA1O43805 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.33■□□□□ 0.53
SSNA1O43805 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSNA1O43805 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.33■□□□□ 0.53
SSNA1O43805 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SSNA1O43805 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SSNA1O43805 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSNA1O43805 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SSNA1O43805 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms