Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF13O43567 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RNF13O43567 MIR3181-201ENST00000578512 73 ntBASIC19.63■□□□□ 0.73
RNF13O43567 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF13O43567 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF13O43567 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RNF13O43567 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF13O43567 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
RNF13O43567 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF13O43567 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF13O43567 MIR4466-201ENST00000606121 54 ntBASIC19.62■□□□□ 0.73
RNF13O43567 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF13O43567 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF13O43567 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF13O43567 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF13O43567 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF13O43567 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF13O43567 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF13O43567 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF13O43567 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF13O43567 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RNF13O43567 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF13O43567 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RNF13O43567 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF13O43567 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF13O43567 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF13O43567 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF13O43567 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF13O43567 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF13O43567 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF13O43567 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF13O43567 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF13O43567 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF13O43567 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF13O43567 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF13O43567 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF13O43567 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF13O43567 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF13O43567 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF13O43567 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF13O43567 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RNF13O43567 SYT6-210ENST00000641643 1587 ntBASIC19.59■□□□□ 0.73
RNF13O43567 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF13O43567 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF13O43567 AC131281.2-201ENST00000520478 145 ntBASIC19.59■□□□□ 0.73
RNF13O43567 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF13O43567 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF13O43567 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF13O43567 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF13O43567 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
RNF13O43567 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RNF13O43567 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF13O43567 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF13O43567 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RNF13O43567 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF13O43567 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF13O43567 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF13O43567 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF13O43567 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.58■□□□□ 0.72
RNF13O43567 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF13O43567 DUX4L19-201ENST00000557448 1267 ntBASIC19.58■□□□□ 0.72
RNF13O43567 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF13O43567 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF13O43567 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF13O43567 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF13O43567 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF13O43567 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF13O43567 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 CA15P2-201ENST00000611168 834 ntBASIC19.57■□□□□ 0.72
RNF13O43567 AC131212.1-201ENST00000613771 668 ntBASIC19.57■□□□□ 0.72
RNF13O43567 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF13O43567 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms