Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNQ2O43526 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ2O43526 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ2O43526 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNQ2O43526 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
KCNQ2O43526 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC28.2■■■□□ 2.11
KCNQ2O43526 AC068338.2-201ENST00000563278 1430 ntBASIC28.2■■■□□ 2.11
KCNQ2O43526 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
KCNQ2O43526 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
KCNQ2O43526 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.2■■■□□ 2.1
KCNQ2O43526 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.2■■■□□ 2.1
KCNQ2O43526 PHB2-213ENST00000546111 858 ntTSL 2 BASIC28.2■■■□□ 2.1
KCNQ2O43526 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
KCNQ2O43526 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNQ2O43526 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC28.19■■■□□ 2.1
KCNQ2O43526 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC28.19■■■□□ 2.1
KCNQ2O43526 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ2O43526 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC28.19■■■□□ 2.1
KCNQ2O43526 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ2O43526 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.19■■■□□ 2.1
KCNQ2O43526 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNQ2O43526 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
KCNQ2O43526 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.18■■■□□ 2.1
KCNQ2O43526 MKRN4P-201ENST00000444706 1521 ntBASIC28.18■■■□□ 2.1
KCNQ2O43526 BAALC-201ENST00000297574 801 ntTSL 3 BASIC28.18■■■□□ 2.1
KCNQ2O43526 AC010141.2-201ENST00000452426 721 ntBASIC28.18■■■□□ 2.1
KCNQ2O43526 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC28.18■■■□□ 2.1
KCNQ2O43526 RARRES2P4-201ENST00000514074 484 ntBASIC28.18■■■□□ 2.1
KCNQ2O43526 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC28.18■■■□□ 2.1
KCNQ2O43526 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
KCNQ2O43526 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.18■■■□□ 2.1
KCNQ2O43526 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ2O43526 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNQ2O43526 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ2O43526 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
KCNQ2O43526 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ2O43526 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ2O43526 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.17■■■□□ 2.1
KCNQ2O43526 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
KCNQ2O43526 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.17■■■□□ 2.1
KCNQ2O43526 CYP2T1P-201ENST00000432607 1285 ntBASIC28.17■■■□□ 2.1
KCNQ2O43526 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.17■■■□□ 2.1
KCNQ2O43526 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.17■■■□□ 2.1
KCNQ2O43526 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.17■■■□□ 2.1
KCNQ2O43526 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.17■■■□□ 2.1
KCNQ2O43526 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ2O43526 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
KCNQ2O43526 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.16■■■□□ 2.1
KCNQ2O43526 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
KCNQ2O43526 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
KCNQ2O43526 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.16■■■□□ 2.1
KCNQ2O43526 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC28.16■■■□□ 2.1
KCNQ2O43526 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
KCNQ2O43526 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 AC093787.1-201ENST00000450396 207 ntBASIC28.16■■■□□ 2.1
KCNQ2O43526 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.16■■■□□ 2.1
KCNQ2O43526 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
KCNQ2O43526 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC28.15■■■□□ 2.1
KCNQ2O43526 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.15■■■□□ 2.1
KCNQ2O43526 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ2O43526 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ2O43526 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ2O43526 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC28.15■■■□□ 2.1
KCNQ2O43526 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.15■■■□□ 2.1
KCNQ2O43526 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.15■■■□□ 2.1
KCNQ2O43526 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
KCNQ2O43526 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
KCNQ2O43526 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
KCNQ2O43526 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
KCNQ2O43526 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ2O43526 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ2O43526 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ2O43526 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.14■■■□□ 2.1
KCNQ2O43526 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
KCNQ2O43526 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC28.14■■■□□ 2.1
KCNQ2O43526 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC28.14■■■□□ 2.1
KCNQ2O43526 AL158047.1-201ENST00000445918 881 ntBASIC28.14■■■□□ 2.1
KCNQ2O43526 TERF1P5-201ENST00000477545 1207 ntBASIC28.14■■■□□ 2.1
KCNQ2O43526 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC28.14■■■□□ 2.1
KCNQ2O43526 AC138907.5-202ENST00000569484 235 ntBASIC28.14■■■□□ 2.1
KCNQ2O43526 AC083880.1-201ENST00000608266 535 ntBASIC28.14■■■□□ 2.1
KCNQ2O43526 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.14■■■□□ 2.09
KCNQ2O43526 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.13■■■□□ 2.09
KCNQ2O43526 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNQ2O43526 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC28.13■■■□□ 2.09
KCNQ2O43526 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
KCNQ2O43526 KRT18P20-201ENST00000548986 1279 ntBASIC28.13■■■□□ 2.09
KCNQ2O43526 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.13■■■□□ 2.09
KCNQ2O43526 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC28.13■■■□□ 2.09
KCNQ2O43526 AC013268.1-206ENST00000638368 961 ntBASIC28.13■■■□□ 2.09
KCNQ2O43526 AC112229.1-201ENST00000639295 961 ntBASIC28.13■■■□□ 2.09
KCNQ2O43526 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
KCNQ2O43526 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
KCNQ2O43526 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms