Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.87■□□□□ 0.77
ARHGEF9O43307 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ARHGEF9O43307 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.86■□□□□ 0.77
ARHGEF9O43307 LINC01529-204ENST00000636474 1715 ntBASIC19.86■□□□□ 0.77
ARHGEF9O43307 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 UNC93B3-201ENST00000308076 687 ntBASIC19.86■□□□□ 0.77
ARHGEF9O43307 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ARHGEF9O43307 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.86■□□□□ 0.77
ARHGEF9O43307 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ARHGEF9O43307 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.86■□□□□ 0.77
ARHGEF9O43307 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARHGEF9O43307 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ARHGEF9O43307 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARHGEF9O43307 AL136162.1-201ENST00000607711 1078 ntBASIC19.85■□□□□ 0.77
ARHGEF9O43307 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ARHGEF9O43307 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.85■□□□□ 0.77
ARHGEF9O43307 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ARHGEF9O43307 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 FP325331.1-202ENST00000623531 1380 ntBASIC19.84■□□□□ 0.77
ARHGEF9O43307 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 AC135279.3-201ENST00000610945 1311 ntBASIC19.84■□□□□ 0.77
ARHGEF9O43307 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 EDA-201ENST00000338901 1233 ntBASIC19.84■□□□□ 0.77
ARHGEF9O43307 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.84■□□□□ 0.77
ARHGEF9O43307 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARHGEF9O43307 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARHGEF9O43307 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARHGEF9O43307 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARHGEF9O43307 ESRRAP2-201ENST00000418437 1549 ntBASIC19.83■□□□□ 0.77
ARHGEF9O43307 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.83■□□□□ 0.77
ARHGEF9O43307 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.83■□□□□ 0.77
ARHGEF9O43307 SRD5A1P1-201ENST00000442297 786 ntBASIC19.83■□□□□ 0.77
ARHGEF9O43307 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
ARHGEF9O43307 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ARHGEF9O43307 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.83■□□□□ 0.76
ARHGEF9O43307 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.83■□□□□ 0.76
ARHGEF9O43307 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARHGEF9O43307 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ARHGEF9O43307 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.82■□□□□ 0.76
ARHGEF9O43307 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.82■□□□□ 0.76
ARHGEF9O43307 AC026271.2-201ENST00000428091 497 ntBASIC19.82■□□□□ 0.76
ARHGEF9O43307 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.82■□□□□ 0.76
ARHGEF9O43307 AL355001.2-201ENST00000620617 1191 ntBASIC19.82■□□□□ 0.76
ARHGEF9O43307 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.82■□□□□ 0.76
ARHGEF9O43307 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ARHGEF9O43307 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARHGEF9O43307 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ARHGEF9O43307 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ARHGEF9O43307 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 AC009102.2-201ENST00000606772 1639 ntBASIC19.81■□□□□ 0.76
ARHGEF9O43307 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ARHGEF9O43307 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ARHGEF9O43307 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
ARHGEF9O43307 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ARHGEF9O43307 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF9O43307 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ARHGEF9O43307 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
ARHGEF9O43307 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms