Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFS4O43181 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.72■□□□□ 0.91
NDUFS4O43181 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NDUFS4O43181 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NDUFS4O43181 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NDUFS4O43181 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.71■□□□□ 0.91
NDUFS4O43181 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.71■□□□□ 0.91
NDUFS4O43181 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.71■□□□□ 0.91
NDUFS4O43181 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NDUFS4O43181 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.71■□□□□ 0.91
NDUFS4O43181 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NDUFS4O43181 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NDUFS4O43181 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.7■□□□□ 0.9
NDUFS4O43181 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.7■□□□□ 0.9
NDUFS4O43181 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.7■□□□□ 0.9
NDUFS4O43181 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.7■□□□□ 0.9
NDUFS4O43181 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NDUFS4O43181 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.7■□□□□ 0.9
NDUFS4O43181 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.7■□□□□ 0.9
NDUFS4O43181 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NDUFS4O43181 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.7■□□□□ 0.9
NDUFS4O43181 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS4O43181 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.69■□□□□ 0.9
NDUFS4O43181 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.69■□□□□ 0.9
NDUFS4O43181 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NDUFS4O43181 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.69■□□□□ 0.9
NDUFS4O43181 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NDUFS4O43181 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.69■□□□□ 0.9
NDUFS4O43181 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NDUFS4O43181 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFS4O43181 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NDUFS4O43181 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NDUFS4O43181 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.68■□□□□ 0.9
NDUFS4O43181 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFS4O43181 OR7E47P-201ENST00000546390 1422 ntBASIC20.68■□□□□ 0.9
NDUFS4O43181 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.68■□□□□ 0.9
NDUFS4O43181 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NDUFS4O43181 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 MIR572-201ENST00000384983 95 ntBASIC20.67■□□□□ 0.9
NDUFS4O43181 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.67■□□□□ 0.9
NDUFS4O43181 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
NDUFS4O43181 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.67■□□□□ 0.9
NDUFS4O43181 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NDUFS4O43181 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NDUFS4O43181 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
NDUFS4O43181 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS4O43181 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NDUFS4O43181 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.66■□□□□ 0.9
NDUFS4O43181 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.66■□□□□ 0.9
NDUFS4O43181 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.66■□□□□ 0.9
NDUFS4O43181 AC105233.4-201ENST00000642045 216 ntBASIC20.66■□□□□ 0.9
NDUFS4O43181 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.66■□□□□ 0.9
NDUFS4O43181 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.66■□□□□ 0.9
NDUFS4O43181 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS4O43181 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS4O43181 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NDUFS4O43181 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.66■□□□□ 0.9
NDUFS4O43181 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.66■□□□□ 0.9
NDUFS4O43181 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.65■□□□□ 0.9
NDUFS4O43181 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.65■□□□□ 0.9
NDUFS4O43181 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.65■□□□□ 0.9
NDUFS4O43181 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NDUFS4O43181 IRS3P-201ENST00000223076 1006 ntBASIC20.65■□□□□ 0.9
NDUFS4O43181 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NDUFS4O43181 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NDUFS4O43181 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms