Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.36■□□□□ 0.53
SHOXO15266 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHOXO15266 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SHOXO15266 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SHOXO15266 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SHOXO15266 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.35■□□□□ 0.53
SHOXO15266 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SHOXO15266 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.35■□□□□ 0.53
SHOXO15266 AF131216.4-201ENST00000638924 1588 ntBASIC18.35■□□□□ 0.53
SHOXO15266 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SHOXO15266 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SHOXO15266 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.35■□□□□ 0.53
SHOXO15266 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.35■□□□□ 0.53
SHOXO15266 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SHOXO15266 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 ANOS2P-203ENST00000472227 1816 ntBASIC18.35■□□□□ 0.53
SHOXO15266 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SHOXO15266 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
SHOXO15266 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.34■□□□□ 0.53
SHOXO15266 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.34■□□□□ 0.53
SHOXO15266 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.34■□□□□ 0.53
SHOXO15266 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SHOXO15266 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHOXO15266 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHOXO15266 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHOXO15266 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SHOXO15266 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHOXO15266 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.33■□□□□ 0.53
SHOXO15266 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
SHOXO15266 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SHOXO15266 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SHOXO15266 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.33■□□□□ 0.53
SHOXO15266 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
SHOXO15266 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.33■□□□□ 0.52
SHOXO15266 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.33■□□□□ 0.52
SHOXO15266 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.33■□□□□ 0.52
SHOXO15266 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SHOXO15266 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.33■□□□□ 0.52
SHOXO15266 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.33■□□□□ 0.52
SHOXO15266 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SHOXO15266 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHOXO15266 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHOXO15266 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SHOXO15266 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.32■□□□□ 0.52
SHOXO15266 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SHOXO15266 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SHOXO15266 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHOXO15266 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
SHOXO15266 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHOXO15266 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHOXO15266 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms