Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.59■■□□□ 1.05
PFDN6O15212 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PFDN6O15212 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PFDN6O15212 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.59■■□□□ 1.05
PFDN6O15212 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
PFDN6O15212 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.59■■□□□ 1.05
PFDN6O15212 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PFDN6O15212 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PFDN6O15212 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PFDN6O15212 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN6O15212 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
PFDN6O15212 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN6O15212 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PFDN6O15212 UNC93B3-201ENST00000308076 687 ntBASIC21.58■■□□□ 1.05
PFDN6O15212 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN6O15212 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN6O15212 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PFDN6O15212 AP005435.1-201ENST00000529293 1178 ntBASIC21.58■■□□□ 1.05
PFDN6O15212 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.58■■□□□ 1.05
PFDN6O15212 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.58■■□□□ 1.05
PFDN6O15212 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PFDN6O15212 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
PFDN6O15212 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.58■■□□□ 1.04
PFDN6O15212 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PFDN6O15212 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PFDN6O15212 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PFDN6O15212 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PFDN6O15212 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PFDN6O15212 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PFDN6O15212 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PFDN6O15212 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PFDN6O15212 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.57■■□□□ 1.04
PFDN6O15212 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.57■■□□□ 1.04
PFDN6O15212 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.56■■□□□ 1.04
PFDN6O15212 OR7E47P-201ENST00000546390 1422 ntBASIC21.56■■□□□ 1.04
PFDN6O15212 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PFDN6O15212 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
PFDN6O15212 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.56■■□□□ 1.04
PFDN6O15212 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.56■■□□□ 1.04
PFDN6O15212 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PFDN6O15212 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.56■■□□□ 1.04
PFDN6O15212 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PFDN6O15212 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
PFDN6O15212 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PFDN6O15212 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.55■■□□□ 1.04
PFDN6O15212 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PFDN6O15212 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PFDN6O15212 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.55■■□□□ 1.04
PFDN6O15212 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.55■■□□□ 1.04
PFDN6O15212 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.55■■□□□ 1.04
PFDN6O15212 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.55■■□□□ 1.04
PFDN6O15212 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.55■■□□□ 1.04
PFDN6O15212 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PFDN6O15212 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.55■■□□□ 1.04
PFDN6O15212 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PFDN6O15212 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PFDN6O15212 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PFDN6O15212 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.54■■□□□ 1.04
PFDN6O15212 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PFDN6O15212 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PFDN6O15212 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PFDN6O15212 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.54■■□□□ 1.04
PFDN6O15212 AC010525.1-201ENST00000585559 441 ntBASIC21.54■■□□□ 1.04
PFDN6O15212 AL136162.1-201ENST00000607711 1078 ntBASIC21.54■■□□□ 1.04
PFDN6O15212 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN6O15212 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.54■■□□□ 1.04
PFDN6O15212 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN6O15212 OXCT2P1-201ENST00000447263 1535 ntBASIC21.54■■□□□ 1.04
PFDN6O15212 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN6O15212 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PFDN6O15212 AC135279.3-201ENST00000610945 1311 ntBASIC21.54■■□□□ 1.04
PFDN6O15212 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms