Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.53■□□□□ 0.72
SMAD9O15198 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.53■□□□□ 0.72
SMAD9O15198 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 AC087742.1-201ENST00000575880 1738 ntBASIC19.53■□□□□ 0.72
SMAD9O15198 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMAD9O15198 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.53■□□□□ 0.72
SMAD9O15198 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
SMAD9O15198 TSPY26P-201ENST00000476365 1326 ntBASIC19.52■□□□□ 0.72
SMAD9O15198 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD9O15198 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD9O15198 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD9O15198 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.52■□□□□ 0.72
SMAD9O15198 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.52■□□□□ 0.72
SMAD9O15198 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.52■□□□□ 0.72
SMAD9O15198 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD9O15198 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.52■□□□□ 0.72
SMAD9O15198 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMAD9O15198 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.52■□□□□ 0.72
SMAD9O15198 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMAD9O15198 EP400NL-214ENST00000641289 2402 ntBASIC19.52■□□□□ 0.71
SMAD9O15198 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SMAD9O15198 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
SMAD9O15198 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.51■□□□□ 0.71
SMAD9O15198 AC010141.3-201ENST00000456659 717 ntBASIC19.51■□□□□ 0.71
SMAD9O15198 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.51■□□□□ 0.71
SMAD9O15198 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD9O15198 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SMAD9O15198 AC087239.1-201ENST00000622671 572 ntBASIC19.51■□□□□ 0.71
SMAD9O15198 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD9O15198 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD9O15198 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.51■□□□□ 0.71
SMAD9O15198 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD9O15198 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD9O15198 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMAD9O15198 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMAD9O15198 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 AL117328.2-201ENST00000624617 1940 ntBASIC19.5■□□□□ 0.71
SMAD9O15198 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMAD9O15198 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SMAD9O15198 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMAD9O15198 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMAD9O15198 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SMAD9O15198 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SMAD9O15198 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.49■□□□□ 0.71
SMAD9O15198 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SMAD9O15198 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMAD9O15198 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.48■□□□□ 0.71
SMAD9O15198 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.48■□□□□ 0.71
SMAD9O15198 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SMAD9O15198 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 MIR935-201ENST00000401179 91 ntBASIC19.48■□□□□ 0.71
SMAD9O15198 ZNRF2P3-201ENST00000424200 374 ntBASIC19.48■□□□□ 0.71
SMAD9O15198 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.48■□□□□ 0.71
SMAD9O15198 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.48■□□□□ 0.71
SMAD9O15198 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.48■□□□□ 0.71
SMAD9O15198 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
SMAD9O15198 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.48■□□□□ 0.71
SMAD9O15198 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.48■□□□□ 0.71
SMAD9O15198 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMAD9O15198 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.48■□□□□ 0.71
SMAD9O15198 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 LINC00565-201ENST00000562710 2331 ntBASIC19.47■□□□□ 0.71
SMAD9O15198 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.47■□□□□ 0.71
SMAD9O15198 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SMAD9O15198 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SMAD9O15198 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMAD9O15198 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMAD9O15198 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms