Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH17O14917 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH17O14917 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH17O14917 AC137767.1-201ENST00000602918 1920 ntBASIC20.59■□□□□ 0.89
PCDH17O14917 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH17O14917 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PCDH17O14917 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH17O14917 AC027612.3-201ENST00000413684 1047 ntBASIC20.59■□□□□ 0.89
PCDH17O14917 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH17O14917 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH17O14917 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH17O14917 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH17O14917 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH17O14917 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH17O14917 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH17O14917 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH17O14917 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH17O14917 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH17O14917 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDH17O14917 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH17O14917 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH17O14917 AC123595.1-201ENST00000440769 1046 ntBASIC20.58■□□□□ 0.89
PCDH17O14917 YBX1P1-201ENST00000445822 960 ntBASIC20.58■□□□□ 0.89
PCDH17O14917 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDH17O14917 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PCDH17O14917 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDH17O14917 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH17O14917 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH17O14917 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH17O14917 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
PCDH17O14917 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PCDH17O14917 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH17O14917 AC012414.1-201ENST00000556676 535 ntBASIC20.57■□□□□ 0.88
PCDH17O14917 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH17O14917 AC087623.3-201ENST00000607047 1098 ntBASIC20.57■□□□□ 0.88
PCDH17O14917 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH17O14917 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH17O14917 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH17O14917 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDH17O14917 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH17O14917 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH17O14917 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH17O14917 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH17O14917 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.56■□□□□ 0.88
PCDH17O14917 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH17O14917 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDH17O14917 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH17O14917 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH17O14917 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH17O14917 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH17O14917 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH17O14917 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH17O14917 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH17O14917 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH17O14917 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH17O14917 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH17O14917 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH17O14917 AC004687.1-201ENST00000579003 1625 ntBASIC20.55■□□□□ 0.88
PCDH17O14917 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH17O14917 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH17O14917 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDH17O14917 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDH17O14917 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH17O14917 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH17O14917 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH17O14917 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH17O14917 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH17O14917 AL031602.1-201ENST00000633169 911 ntBASIC20.54■□□□□ 0.88
PCDH17O14917 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 AC007375.3-201ENST00000600936 2314 ntBASIC20.54■□□□□ 0.88
PCDH17O14917 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDH17O14917 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH17O14917 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH17O14917 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH17O14917 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH17O14917 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDH17O14917 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH17O14917 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH17O14917 AL162430.1-201ENST00000480705 870 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms