Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL512625.2-201ENST00000417533 625 ntBASIC35.71■■■■□ 3.31
CHD1O14646 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC35.71■■■■□ 3.31
CHD1O14646 DUSP8P4-201ENST00000399538 1761 ntBASIC35.7■■■■□ 3.31
CHD1O14646 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CHD1O14646 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC35.7■■■■□ 3.31
CHD1O14646 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CHD1O14646 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC35.7■■■■□ 3.31
CHD1O14646 AC097658.1-201ENST00000475555 843 ntBASIC35.7■■■■□ 3.31
CHD1O14646 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC35.7■■■■□ 3.31
CHD1O14646 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC35.7■■■■□ 3.31
CHD1O14646 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC35.7■■■■□ 3.31
CHD1O14646 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC35.7■■■■□ 3.31
CHD1O14646 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CHD1O14646 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CHD1O14646 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CHD1O14646 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CHD1O14646 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
CHD1O14646 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC35.69■■■■□ 3.3
CHD1O14646 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC35.69■■■■□ 3.3
CHD1O14646 ISCU-212ENST00000547005 795 ntTSL 3 BASIC35.69■■■■□ 3.3
CHD1O14646 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CHD1O14646 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC35.68■■■■□ 3.3
CHD1O14646 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC35.68■■■■□ 3.3
CHD1O14646 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CHD1O14646 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CHD1O14646 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CHD1O14646 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
CHD1O14646 TERF1P5-201ENST00000477545 1207 ntBASIC35.68■■■■□ 3.3
CHD1O14646 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC35.68■■■■□ 3.3
CHD1O14646 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC35.68■■■■□ 3.3
CHD1O14646 LINC01023-201ENST00000606054 436 ntBASIC35.68■■■■□ 3.3
CHD1O14646 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CHD1O14646 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC35.67■■■■□ 3.3
CHD1O14646 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CHD1O14646 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CHD1O14646 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC35.66■■■■□ 3.3
CHD1O14646 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC35.66■■■■□ 3.3
CHD1O14646 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC35.66■■■■□ 3.3
CHD1O14646 RPS20-210ENST00000523936 899 ntTSL 2 BASIC35.66■■■■□ 3.3
CHD1O14646 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC35.66■■■■□ 3.3
CHD1O14646 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC35.66■■■■□ 3.3
CHD1O14646 AC069236.1-201ENST00000604339 616 ntBASIC35.66■■■■□ 3.3
CHD1O14646 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC35.66■■■■□ 3.3
CHD1O14646 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC35.66■■■■□ 3.3
CHD1O14646 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CHD1O14646 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC35.65■■■■□ 3.3
CHD1O14646 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC35.65■■■■□ 3.3
CHD1O14646 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CHD1O14646 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CHD1O14646 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC35.65■■■■□ 3.3
CHD1O14646 UBE2SP1-201ENST00000450587 669 ntBASIC35.65■■■■□ 3.3
CHD1O14646 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC35.65■■■■□ 3.3
CHD1O14646 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
CHD1O14646 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
CHD1O14646 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC35.64■■■■□ 3.3
CHD1O14646 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 AC055733.4-201ENST00000638462 1354 ntBASIC35.64■■■■□ 3.3
CHD1O14646 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHD1O14646 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHD1O14646 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CHD1O14646 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC35.63■■■■□ 3.29
CHD1O14646 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC35.63■■■■□ 3.29
CHD1O14646 AC079630.1-202ENST00000618127 1840 ntBASIC35.63■■■■□ 3.29
CHD1O14646 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHD1O14646 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHD1O14646 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC35.63■■■■□ 3.29
CHD1O14646 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CHD1O14646 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CHD1O14646 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC35.62■■■■□ 3.29
CHD1O14646 AC008403.3-201ENST00000598924 454 ntBASIC35.62■■■■□ 3.29
CHD1O14646 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC35.62■■■■□ 3.29
CHD1O14646 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC35.61■■■■□ 3.29
CHD1O14646 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CHD1O14646 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CHD1O14646 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC35.61■■■■□ 3.29
CHD1O14646 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC35.61■■■■□ 3.29
CHD1O14646 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CHD1O14646 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CHD1O14646 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CHD1O14646 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC35.6■■■■□ 3.29
CHD1O14646 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC35.6■■■■□ 3.29
CHD1O14646 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CHD1O14646 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC35.6■■■■□ 3.29
CHD1O14646 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC35.6■■■■□ 3.29
CHD1O14646 DUSP8P5-201ENST00000422884 1815 ntBASIC35.6■■■■□ 3.29
CHD1O14646 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
CHD1O14646 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms