Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NTN3O00634 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NTN3O00634 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NTN3O00634 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NTN3O00634 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NTN3O00634 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NTN3O00634 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.69■□□□□ 0.9
NTN3O00634 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.69■□□□□ 0.9
NTN3O00634 SLC7A5P2-201ENST00000553010 536 ntBASIC20.69■□□□□ 0.9
NTN3O00634 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.69■□□□□ 0.9
NTN3O00634 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
NTN3O00634 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.69■□□□□ 0.9
NTN3O00634 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NTN3O00634 AC005181.1-201ENST00000604782 1256 ntBASIC20.69■□□□□ 0.9
NTN3O00634 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.69■□□□□ 0.9
NTN3O00634 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NTN3O00634 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NTN3O00634 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NTN3O00634 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NTN3O00634 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.68■□□□□ 0.9
NTN3O00634 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NTN3O00634 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.68■□□□□ 0.9
NTN3O00634 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NTN3O00634 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.68■□□□□ 0.9
NTN3O00634 GUSBP6-202ENST00000438529 1198 ntBASIC20.68■□□□□ 0.9
NTN3O00634 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.68■□□□□ 0.9
NTN3O00634 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.68■□□□□ 0.9
NTN3O00634 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NTN3O00634 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NTN3O00634 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NTN3O00634 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.67■□□□□ 0.9
NTN3O00634 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.67■□□□□ 0.9
NTN3O00634 AC138907.5-202ENST00000569484 235 ntBASIC20.67■□□□□ 0.9
NTN3O00634 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NTN3O00634 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NTN3O00634 AC010141.2-201ENST00000452426 721 ntBASIC20.66■□□□□ 0.9
NTN3O00634 KRT18P20-201ENST00000548986 1279 ntBASIC20.66■□□□□ 0.9
NTN3O00634 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NTN3O00634 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NTN3O00634 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.65■□□□□ 0.9
NTN3O00634 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.65■□□□□ 0.9
NTN3O00634 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 AP004607.7-201ENST00000527152 1677 ntBASIC20.65■□□□□ 0.9
NTN3O00634 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.65■□□□□ 0.9
NTN3O00634 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.65■□□□□ 0.9
NTN3O00634 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.65■□□□□ 0.9
NTN3O00634 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.65■□□□□ 0.9
NTN3O00634 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.65■□□□□ 0.9
NTN3O00634 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.65■□□□□ 0.9
NTN3O00634 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.65■□□□□ 0.9
NTN3O00634 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NTN3O00634 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NTN3O00634 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NTN3O00634 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
NTN3O00634 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NTN3O00634 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NTN3O00634 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NTN3O00634 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.64■□□□□ 0.89
NTN3O00634 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NTN3O00634 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NTN3O00634 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NTN3O00634 CNN2P6-201ENST00000439038 900 ntBASIC20.64■□□□□ 0.89
NTN3O00634 CD99P1-205ENST00000527459 561 ntBASIC20.64■□□□□ 0.89
NTN3O00634 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NTN3O00634 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NTN3O00634 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NTN3O00634 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NTN3O00634 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NTN3O00634 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NTN3O00634 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NTN3O00634 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.63■□□□□ 0.89
NTN3O00634 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.63■□□□□ 0.89
NTN3O00634 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.63■□□□□ 0.89
NTN3O00634 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.63■□□□□ 0.89
NTN3O00634 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NTN3O00634 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.63■□□□□ 0.89
NTN3O00634 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NTN3O00634 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NTN3O00634 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NTN3O00634 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
NTN3O00634 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NTN3O00634 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NTN3O00634 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.62■□□□□ 0.89
NTN3O00634 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NTN3O00634 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NTN3O00634 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NTN3O00634 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms