Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.63■□□□□ 0.89
RTCAO00442 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.63■□□□□ 0.89
RTCAO00442 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 OXCT2P1-201ENST00000447263 1535 ntBASIC20.63■□□□□ 0.89
RTCAO00442 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCAO00442 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCAO00442 MIR939-201ENST00000401314 82 ntBASIC20.62■□□□□ 0.89
RTCAO00442 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCAO00442 AC027682.1-201ENST00000562846 899 ntBASIC20.62■□□□□ 0.89
RTCAO00442 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RTCAO00442 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCAO00442 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCAO00442 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCAO00442 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.62■□□□□ 0.89
RTCAO00442 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCAO00442 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCAO00442 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.61■□□□□ 0.89
RTCAO00442 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTCAO00442 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTCAO00442 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.61■□□□□ 0.89
RTCAO00442 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCAO00442 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.61■□□□□ 0.89
RTCAO00442 C11orf96-202ENST00000528572 1834 ntBASIC20.61■□□□□ 0.89
RTCAO00442 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTCAO00442 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
RTCAO00442 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTCAO00442 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RTCAO00442 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
RTCAO00442 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RTCAO00442 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCAO00442 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
RTCAO00442 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.6■□□□□ 0.89
RTCAO00442 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RTCAO00442 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.6■□□□□ 0.89
RTCAO00442 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCAO00442 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCAO00442 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
RTCAO00442 AL136967.2-201ENST00000623968 743 ntBASIC20.6■□□□□ 0.89
RTCAO00442 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTCAO00442 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
RTCAO00442 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCAO00442 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RTCAO00442 OR7E47P-201ENST00000546390 1422 ntBASIC20.6■□□□□ 0.89
RTCAO00442 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCAO00442 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTCAO00442 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RTCAO00442 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RTCAO00442 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
RTCAO00442 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RTCAO00442 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCAO00442 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.59■□□□□ 0.89
RTCAO00442 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCAO00442 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.59■□□□□ 0.89
RTCAO00442 SUDS3P1-201ENST00000505831 966 ntBASIC20.59■□□□□ 0.89
RTCAO00442 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.59■□□□□ 0.89
RTCAO00442 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTCAO00442 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.59■□□□□ 0.89
RTCAO00442 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.59■□□□□ 0.89
RTCAO00442 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RTCAO00442 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.58■□□□□ 0.89
RTCAO00442 IGHV3-19-201ENST00000521488 291 ntBASIC20.58■□□□□ 0.89
RTCAO00442 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.58■□□□□ 0.89
RTCAO00442 AC133561.4-201ENST00000566112 224 ntBASIC20.58■□□□□ 0.89
RTCAO00442 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTCAO00442 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RTCAO00442 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.58■□□□□ 0.88
RTCAO00442 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RTCAO00442 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.57■□□□□ 0.88
RTCAO00442 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
RTCAO00442 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.57■□□□□ 0.88
RTCAO00442 AC005837.3-201ENST00000612163 286 ntBASIC20.57■□□□□ 0.88
RTCAO00442 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.57■□□□□ 0.88
RTCAO00442 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCAO00442 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.57■□□□□ 0.88
RTCAO00442 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms