Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC004812.2-201ENST00000611079 2094 ntBASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CHKB-CPT1BH3BT56 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 OR6D1P-203ENST00000641209 4860 ntBASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 AC126755.1-201ENST00000525846 6405 ntBASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CHKB-CPT1BH3BT56 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 ECEL1P1-201ENST00000373592 1742 ntBASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC12.1□□□□□ -0.47
CHKB-CPT1BH3BT56 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 LETM1P2-201ENST00000597330 2178 ntBASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
CHKB-CPT1BH3BT56 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.47
CHKB-CPT1BH3BT56 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CHKB-CPT1BH3BT56 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHKB-CPT1BH3BT56 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms