Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
LOC285556D6RIA3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LOC285556D6RIA3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
LOC285556D6RIA3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.07■■□□□ 1.6
LOC285556D6RIA3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
LOC285556D6RIA3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LOC285556D6RIA3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LOC285556D6RIA3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 SLC29A4P1-201ENST00000398760 971 ntBASIC25.06■■□□□ 1.6
LOC285556D6RIA3 CYP2T1P-201ENST00000432607 1285 ntBASIC25.06■■□□□ 1.6
LOC285556D6RIA3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LOC285556D6RIA3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 KRT18P20-201ENST00000548986 1279 ntBASIC25.05■■□□□ 1.6
LOC285556D6RIA3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 AC069152.1-201ENST00000438030 544 ntBASIC25.05■■□□□ 1.6
LOC285556D6RIA3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
LOC285556D6RIA3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LOC285556D6RIA3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 AP001160.3-201ENST00000601484 763 ntBASIC25.03■■□□□ 1.6
LOC285556D6RIA3 AC010536.3-201ENST00000620306 533 ntBASIC25.03■■□□□ 1.6
LOC285556D6RIA3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.03■■□□□ 1.6
LOC285556D6RIA3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 AC083906.2-201ENST00000511578 360 ntBASIC25.02■■□□□ 1.6
LOC285556D6RIA3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LOC285556D6RIA3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC285556D6RIA3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.01■■□□□ 1.59
LOC285556D6RIA3 AF201337.1-201ENST00000520239 748 ntBASIC25.01■■□□□ 1.59
LOC285556D6RIA3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
LOC285556D6RIA3 AC079089.2-201ENST00000531211 1277 ntBASIC25.01■■□□□ 1.59
LOC285556D6RIA3 AL034346.1-201ENST00000568244 1277 ntBASIC25.01■■□□□ 1.59
LOC285556D6RIA3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC285556D6RIA3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LOC285556D6RIA3 ANOS2P-203ENST00000472227 1816 ntBASIC25.01■■□□□ 1.59
LOC285556D6RIA3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25■■□□□ 1.59
LOC285556D6RIA3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25■■□□□ 1.59
LOC285556D6RIA3 AC013268.1-206ENST00000638368 961 ntBASIC25■■□□□ 1.59
LOC285556D6RIA3 AC112229.1-201ENST00000639295 961 ntBASIC25■■□□□ 1.59
LOC285556D6RIA3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
LOC285556D6RIA3 AP004607.7-201ENST00000527152 1677 ntBASIC25■■□□□ 1.59
LOC285556D6RIA3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LOC285556D6RIA3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
LOC285556D6RIA3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25■■□□□ 1.59
LOC285556D6RIA3 AP006587.3-201ENST00000525742 1516 ntBASIC25■■□□□ 1.59
LOC285556D6RIA3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 EEF1DP3-203ENST00000566025 782 ntBASIC24.99■■□□□ 1.59
LOC285556D6RIA3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
LOC285556D6RIA3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms