Protein–RNA interactions for Protein: C9J4A7

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9J4A7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.33■□□□□ 0.85
C9J4A7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C9J4A7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C9J4A7 KRT87P-202ENST00000534226 1464 ntBASIC20.33■□□□□ 0.85
C9J4A7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C9J4A7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
C9J4A7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C9J4A7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.33■□□□□ 0.85
C9J4A7 KRT18P11-201ENST00000435214 1283 ntBASIC20.33■□□□□ 0.85
C9J4A7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.33■□□□□ 0.85
C9J4A7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.33■□□□□ 0.85
C9J4A7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C9J4A7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C9J4A7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
C9J4A7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.33■□□□□ 0.84
C9J4A7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C9J4A7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C9J4A7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
C9J4A7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
C9J4A7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.32■□□□□ 0.84
C9J4A7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C9J4A7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.32■□□□□ 0.84
C9J4A7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C9J4A7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.32■□□□□ 0.84
C9J4A7 AC080038.1-201ENST00000611274 1154 ntBASIC20.32■□□□□ 0.84
C9J4A7 BID-214ENST00000617586 542 ntTSL 5 BASIC20.32■□□□□ 0.84
C9J4A7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
C9J4A7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.32■□□□□ 0.84
C9J4A7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C9J4A7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C9J4A7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.31■□□□□ 0.84
C9J4A7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 OR7E47P-201ENST00000546390 1422 ntBASIC20.31■□□□□ 0.84
C9J4A7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
C9J4A7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.31■□□□□ 0.84
C9J4A7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.31■□□□□ 0.84
C9J4A7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
C9J4A7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
C9J4A7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C9J4A7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C9J4A7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.3■□□□□ 0.84
C9J4A7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.3■□□□□ 0.84
C9J4A7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.3■□□□□ 0.84
C9J4A7 AL034346.1-201ENST00000568244 1277 ntBASIC20.3■□□□□ 0.84
C9J4A7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.3■□□□□ 0.84
C9J4A7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C9J4A7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C9J4A7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
C9J4A7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
C9J4A7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.29■□□□□ 0.84
C9J4A7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
C9J4A7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9J4A7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C9J4A7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.28■□□□□ 0.84
C9J4A7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.28■□□□□ 0.84
C9J4A7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
C9J4A7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9J4A7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9J4A7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.28■□□□□ 0.84
C9J4A7 AP004607.7-201ENST00000527152 1677 ntBASIC20.28■□□□□ 0.84
C9J4A7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.28■□□□□ 0.84
C9J4A7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.28■□□□□ 0.84
C9J4A7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9J4A7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
C9J4A7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
C9J4A7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.27■□□□□ 0.84
C9J4A7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
C9J4A7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.27■□□□□ 0.84
C9J4A7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.27■□□□□ 0.84
C9J4A7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.27■□□□□ 0.84
C9J4A7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.27■□□□□ 0.84
C9J4A7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.27■□□□□ 0.84
C9J4A7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9J4A7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
C9J4A7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
C9J4A7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
C9J4A7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
C9J4A7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms