Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 UNC93B8-201ENST00000511903 705 ntBASIC21.54■■□□□ 1.04
CCDC189A1A4V9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC189A1A4V9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC189A1A4V9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC189A1A4V9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC189A1A4V9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
CCDC189A1A4V9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 C11orf96-202ENST00000528572 1834 ntBASIC21.51■■□□□ 1.03
CCDC189A1A4V9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC189A1A4V9 AC004687.1-201ENST00000579003 1625 ntBASIC21.51■■□□□ 1.03
CCDC189A1A4V9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.5■■□□□ 1.03
CCDC189A1A4V9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
CCDC189A1A4V9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC189A1A4V9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC189A1A4V9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC189A1A4V9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms