Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV4S1A1TA0A5B7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV4S1A1TA0A5B7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV4S1A1TA0A5B7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV4S1A1TA0A5B7 LINC01529-204ENST00000636474 1715 ntBASIC17.33■□□□□ 0.37
TCRBV4S1A1TA0A5B7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TCRBV4S1A1TA0A5B7 TSPY26P-201ENST00000476365 1326 ntBASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 DUX4L4-201ENST00000566884 1269 ntBASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC092666.2-201ENST00000613287 246 ntBASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 C11orf96-202ENST00000528572 1834 ntBASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC097381.1-201ENST00000429019 1296 ntBASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AL499627.2-201ENST00000606283 725 ntBASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 MIR6821-201ENST00000617625 74 ntBASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV4S1A1TA0A5B7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AC080038.3-201ENST00000623346 1952 ntBASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV4S1A1TA0A5B7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms