Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
TCRBV3S1A0A5B6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.27■□□□□ 0.83
TCRBV3S1A0A5B6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.27■□□□□ 0.83
TCRBV3S1A0A5B6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV3S1A0A5B6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 AC026471.6-201ENST00000622954 1905 ntBASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV3S1A0A5B6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TCRBV3S1A0A5B6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 KRT18P60-201ENST00000312876 1297 ntBASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.23■□□□□ 0.83
TCRBV3S1A0A5B6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.22■□□□□ 0.83
TCRBV3S1A0A5B6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TCRBV3S1A0A5B6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
TCRBV3S1A0A5B6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TCRBV3S1A0A5B6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV3S1A0A5B6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.2■□□□□ 0.82
TCRBV3S1A0A5B6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.2■□□□□ 0.82
TCRBV3S1A0A5B6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TCRBV3S1A0A5B6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TCRBV3S1A0A5B6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms