Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV27A0A0K0K1C4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 AF106564.1-201ENST00000607058 2553 ntBASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRBV27A0A0K0K1C4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV27A0A0K0K1C4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 AC004987.1-201ENST00000428627 508 ntBASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV27A0A0K0K1C4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV27A0A0K0K1C4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV27A0A0K0K1C4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 TSPY13P-201ENST00000338964 914 ntBASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 AC104564.3-201ENST00000582367 638 ntBASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV27A0A0K0K1C4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV27A0A0K0K1C4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms