Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV18A0A075B6X5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 FEM1AP4-201ENST00000443167 1987 ntBASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 CA15P2-201ENST00000611168 834 ntBASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV18A0A075B6X5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 DUX4L4-201ENST00000566884 1269 ntBASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 PVT1_1.1-201ENST00000615125 194 ntBASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRAV18A0A075B6X5 AL157384.1-201ENST00000445995 2473 ntBASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 AC004687.1-201ENST00000579003 1625 ntBASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRAV18A0A075B6X5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.52■□□□□ 0.55
TRAV18A0A075B6X5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV18A0A075B6X5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV18A0A075B6X5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
TRAV18A0A075B6X5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV18A0A075B6X5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV18A0A075B6X5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 AC074183.2-201ENST00000623112 922 ntBASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRAV18A0A075B6X5 AC005703.6-201ENST00000623265 1329 ntBASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV18A0A075B6X5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms