Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV2-28A0A075B6P5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 MIR4281-201ENST00000580852 62 ntBASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 FEM1AP4-201ENST00000443167 1987 ntBASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IGKV2-28A0A075B6P5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 TSPY13P-201ENST00000338964 914 ntBASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 AC074183.2-201ENST00000623112 922 ntBASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.22□□□□□ -0.13
IGKV2-28A0A075B6P5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
IGKV2-28A0A075B6P5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 AF131216.4-201ENST00000638924 1588 ntBASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
IGKV2-28A0A075B6P5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 AC144652.1-201ENST00000609974 1624 ntBASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 KRT18P24-201ENST00000344739 1156 ntBASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 PVT1_1.1-201ENST00000615125 194 ntBASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.2□□□□□ -0.14
IGKV2-28A0A075B6P5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms