Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 SHH4YLR164W 507 nt8.42□□□□□ -1.06
ATG40Q99325 GAP1YKR039W 1809 nt8.42□□□□□ -1.06
ATG40Q99325 YCR087WYCR087W 516 nt8.41□□□□□ -1.06
ATG40Q99325 PRO1YDR300C 1287 nt8.41□□□□□ -1.06
ATG40Q99325 PHO89YBR296C 1725 nt8.4□□□□□ -1.06
ATG40Q99325 SFA1YDL168W 1161 nt8.4□□□□□ -1.06
ATG40Q99325 YHL019W-AYHL019W-A 594 nt8.4□□□□□ -1.06
ATG40Q99325 YSR3YKR053C 1215 nt8.4□□□□□ -1.06
ATG40Q99325 MSF1YPR047W 1410 nt8.39□□□□□ -1.07
ATG40Q99325 SAM35YHR083W 990 nt8.39□□□□□ -1.07
ATG40Q99325 ATG15YCR068W 1563 nt8.38□□□□□ -1.07
ATG40Q99325 UTR1YJR049C 1593 nt8.35□□□□□ -1.07
ATG40Q99325 PRM5YIL117C 957 nt8.35□□□□□ -1.07
ATG40Q99325 ALD4YOR374W 1560 nt8.35□□□□□ -1.07
ATG40Q99325 MRP20YDR405W 792 nt8.34□□□□□ -1.07
ATG40Q99325 TOM6YOR045W 186 nt8.34□□□□□ -1.07
ATG40Q99325 NDI1YML120C 1542 nt8.32□□□□□ -1.08
ATG40Q99325 YFL015W-AYFL015W-A 318 nt8.31□□□□□ -1.08
ATG40Q99325 YGL034CYGL034C 366 nt8.31□□□□□ -1.08
ATG40Q99325 HIF1YLL022C 1158 nt8.31□□□□□ -1.08
ATG40Q99325 COQ2YNR041C 1119 nt8.31□□□□□ -1.08
ATG40Q99325 HSL7YBR133C 2484 nt8.3□□□□□ -1.08
ATG40Q99325 DIF1YLR437C 402 nt8.29□□□□□ -1.08
ATG40Q99325 AIM45YPR004C 1035 nt8.29□□□□□ -1.08
ATG40Q99325 TIF6YPR016C 738 nt8.29□□□□□ -1.08
ATG40Q99325 HIP1YGR191W 1812 nt8.29□□□□□ -1.08
ATG40Q99325 CLB6YGR109C 1143 nt8.28□□□□□ -1.08
ATG40Q99325 XYL2YLR070C 1071 nt8.28□□□□□ -1.08
ATG40Q99325 RPL4BYDR012W 1089 nt8.27□□□□□ -1.09
ATG40Q99325 MET28YIR017C 564 nt8.27□□□□□ -1.09
ATG40Q99325 PEX2YJL210W 816 nt8.27□□□□□ -1.09
ATG40Q99325 RPL4AYBR031W 1089 nt8.27□□□□□ -1.09
ATG40Q99325 YAT1YAR035W 2064 nt8.26□□□□□ -1.09
ATG40Q99325 UTH1YKR042W 1098 nt8.26□□□□□ -1.09
ATG40Q99325 YAR028WYAR028W 705 nt8.22□□□□□ -1.09
ATG40Q99325 NRT1YOR071C 1797 nt8.22□□□□□ -1.09
ATG40Q99325 FIT3YOR383C 615 nt8.21□□□□□ -1.1
ATG40Q99325 ZRT3YKL175W 1512 nt8.19□□□□□ -1.1
ATG40Q99325 INA1YLR413W 2028 nt8.19□□□□□ -1.1
ATG40Q99325 RPS14BYJL191W 417 nt8.19□□□□□ -1.1
ATG40Q99325 SPT20YOL148C 1815 nt8.19□□□□□ -1.1
ATG40Q99325 RDN25-1RDN25-1 3396 nt8.18□□□□□ -1.1
ATG40Q99325 RDN25-2RDN25-2 3396 nt8.18□□□□□ -1.1
ATG40Q99325 DBP1YPL119C 1854 nt8.17□□□□□ -1.1
ATG40Q99325 HXT1YHR094C 1713 nt8.17□□□□□ -1.1
ATG40Q99325 RBG1YAL036C 1110 nt8.16□□□□□ -1.1
ATG40Q99325 SED1YDR077W 1017 nt8.15□□□□□ -1.1
ATG40Q99325 HEL2YDR266C 1920 nt8.13□□□□□ -1.11
ATG40Q99325 ALP1YNL270C 1722 nt8.13□□□□□ -1.11
ATG40Q99325 LIP1YMR298W 453 nt8.13□□□□□ -1.11
ATG40Q99325 MTG2YHR168W 1557 nt8.13□□□□□ -1.11
ATG40Q99325 TSC10YBR265W 963 nt8.11□□□□□ -1.11
ATG40Q99325 AKR2YOR034C 2250 nt8.1□□□□□ -1.11
ATG40Q99325 YBL086CYBL086C 1401 nt8.08□□□□□ -1.12
ATG40Q99325 SHY1YGR112W 1170 nt8.07□□□□□ -1.12
ATG40Q99325 RPM1RPM1 483 nt8.07□□□□□ -1.12
ATG40Q99325 YER190C-AYER190C-A 576 nt8.06□□□□□ -1.12
ATG40Q99325 YGR296C-AYGR296C-A 576 nt8.06□□□□□ -1.12
ATG40Q99325 YML133W-AYML133W-A 576 nt8.06□□□□□ -1.12
ATG40Q99325 YNL339W-AYNL339W-A 576 nt8.06□□□□□ -1.12
ATG40Q99325 YPL283W-AYPL283W-A 576 nt8.06□□□□□ -1.12
ATG40Q99325 RPC82YPR190C 1965 nt8.06□□□□□ -1.12
ATG40Q99325 SAM1YLR180W 1149 nt8.05□□□□□ -1.12
ATG40Q99325 ZTA1YBR046C 1005 nt8.05□□□□□ -1.12
ATG40Q99325 LEU9YOR108W 1815 nt8.04□□□□□ -1.12
ATG40Q99325 YJL067WYJL067W 351 nt8.04□□□□□ -1.12
ATG40Q99325 YLR279WYLR279W 390 nt8.03□□□□□ -1.12
ATG40Q99325 SDH5YOL071W 489 nt8.03□□□□□ -1.12
ATG40Q99325 RIM8YGL045W 1629 nt8.03□□□□□ -1.12
ATG40Q99325 URA6YKL024C 615 nt8.02□□□□□ -1.13
ATG40Q99325 YGR012WYGR012W 1182 nt8□□□□□ -1.13
ATG40Q99325 BRR1YPR057W 1026 nt8□□□□□ -1.13
ATG40Q99325 GLR1YPL091W 1452 nt8□□□□□ -1.13
ATG40Q99325 RAD23YEL037C 1197 nt7.99□□□□□ -1.13
ATG40Q99325 TOA2YKL058W 369 nt7.99□□□□□ -1.13
ATG40Q99325 YPL251WYPL251W 303 nt7.99□□□□□ -1.13
ATG40Q99325 UFO1YML088W 2007 nt7.98□□□□□ -1.13
ATG40Q99325 APT2YDR441C 546 nt7.96□□□□□ -1.14
ATG40Q99325 MSB4YOL112W 1479 nt7.95□□□□□ -1.14
ATG40Q99325 TRT2tT(CGU)K 72 nt7.95□□□□□ -1.14
ATG40Q99325 YLR111WYLR111W 333 nt7.95□□□□□ -1.14
ATG40Q99325 SBA1YKL117W 651 nt7.94□□□□□ -1.14
ATG40Q99325 PET8YNL003C 855 nt7.94□□□□□ -1.14
ATG40Q99325 OYE3YPL171C 1203 nt7.94□□□□□ -1.14
ATG40Q99325 YMR226CYMR226C 804 nt7.93□□□□□ -1.14
ATG40Q99325 MEP3YPR138C 1470 nt7.93□□□□□ -1.14
ATG40Q99325 YPL222C-AYPL222C-A 246 nt7.92□□□□□ -1.14
ATG40Q99325 MET2YNL277W 1461 nt7.92□□□□□ -1.14
ATG40Q99325 GND2YGR256W 1479 nt7.91□□□□□ -1.14
ATG40Q99325 FCY21YER060W 1587 nt7.91□□□□□ -1.14
ATG40Q99325 MUP1YGR055W 1725 nt7.91□□□□□ -1.14
ATG40Q99325 YMR103CYMR103C 363 nt7.9□□□□□ -1.14
ATG40Q99325 YGL114WYGL114W 2178 nt7.89□□□□□ -1.15
ATG40Q99325 CWC15YDR163W 528 nt7.89□□□□□ -1.15
ATG40Q99325 RIB3YDR487C 627 nt7.89□□□□□ -1.15
ATG40Q99325 SAM2YDR502C 1155 nt7.89□□□□□ -1.15
ATG40Q99325 YMR244WYMR244W 1068 nt7.89□□□□□ -1.15
ATG40Q99325 OXA1YER154W 1209 nt7.88□□□□□ -1.15
ATG40Q99325 UGA4YDL210W 1716 nt7.88□□□□□ -1.15
ATG40Q99325 SEC61YLR378C 1443 nt7.87□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 6.2 ms