Protein–RNA interactions for Protein: Q12348

RRI2, COP9 signalosome complex subunit 10, yeastyeast

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRI2Q12348 TOM6YOR045W 186 nt11.84□□□□□ -0.51
RRI2Q12348 UTH1YKR042W 1098 nt11.82□□□□□ -0.52
RRI2Q12348 YML089CYML089C 369 nt11.82□□□□□ -0.52
RRI2Q12348 HIP1YGR191W 1812 nt11.81□□□□□ -0.52
RRI2Q12348 FUR4YBR021W 1902 nt11.78□□□□□ -0.52
RRI2Q12348 PRO1YDR300C 1287 nt11.78□□□□□ -0.52
RRI2Q12348 YLR111WYLR111W 333 nt11.78□□□□□ -0.52
RRI2Q12348 PEX2YJL210W 816 nt11.77□□□□□ -0.53
RRI2Q12348 ARP6YLR085C 1317 nt11.77□□□□□ -0.53
RRI2Q12348 SDH5YOL071W 489 nt11.74□□□□□ -0.53
RRI2Q12348 RAD23YEL037C 1197 nt11.73□□□□□ -0.53
RRI2Q12348 TIF6YPR016C 738 nt11.73□□□□□ -0.53
RRI2Q12348 NRT1YOR071C 1797 nt11.72□□□□□ -0.53
RRI2Q12348 TSC10YBR265W 963 nt11.71□□□□□ -0.53
RRI2Q12348 ATG15YCR068W 1563 nt11.71□□□□□ -0.54
RRI2Q12348 MET28YIR017C 564 nt11.7□□□□□ -0.54
RRI2Q12348 RTN2YDL204W 1182 nt11.69□□□□□ -0.54
RRI2Q12348 SAM1YLR180W 1149 nt11.68□□□□□ -0.54
RRI2Q12348 YGR012WYGR012W 1182 nt11.66□□□□□ -0.54
RRI2Q12348 YLR437C-AYLR437C-A 228 nt11.65□□□□□ -0.54
RRI2Q12348 GAP1YKR039W 1809 nt11.65□□□□□ -0.55
RRI2Q12348 PLB1YMR008C 1995 nt11.62□□□□□ -0.55
RRI2Q12348 CAB5YDR196C 726 nt11.61□□□□□ -0.55
RRI2Q12348 RIB3YDR487C 627 nt11.61□□□□□ -0.55
RRI2Q12348 FIT3YOR383C 615 nt11.61□□□□□ -0.55
RRI2Q12348 YLR279WYLR279W 390 nt11.6□□□□□ -0.55
RRI2Q12348 YKR005CYKR005C 1578 nt11.58□□□□□ -0.56
RRI2Q12348 YGR259CYGR259C 441 nt11.55□□□□□ -0.56
RRI2Q12348 MSB4YOL112W 1479 nt11.53□□□□□ -0.56
RRI2Q12348 NVJ2YPR091C 2313 nt11.52□□□□□ -0.57
RRI2Q12348 DIF1YLR437C 402 nt11.51□□□□□ -0.57
RRI2Q12348 HSP60YLR259C 1719 nt11.51□□□□□ -0.57
RRI2Q12348 PRP4YPR178W 1398 nt11.49□□□□□ -0.57
RRI2Q12348 UTR1YJR049C 1593 nt11.47□□□□□ -0.57
RRI2Q12348 YAR028WYAR028W 705 nt11.47□□□□□ -0.57
RRI2Q12348 YPL222C-AYPL222C-A 246 nt11.47□□□□□ -0.57
RRI2Q12348 ALP1YNL270C 1722 nt11.43□□□□□ -0.58
RRI2Q12348 MTG2YHR168W 1557 nt11.42□□□□□ -0.58
RRI2Q12348 DPS1YLL018C 1674 nt11.41□□□□□ -0.58
RRI2Q12348 ZTA1YBR046C 1005 nt11.41□□□□□ -0.58
RRI2Q12348 BMT6YLR063W 1098 nt11.4□□□□□ -0.58
RRI2Q12348 AKR2YOR034C 2250 nt11.38□□□□□ -0.59
RRI2Q12348 RPM1RPM1 483 nt11.37□□□□□ -0.59
RRI2Q12348 GND1YHR183W 1470 nt11.37□□□□□ -0.59
RRI2Q12348 YPI1YFR003C 468 nt11.36□□□□□ -0.59
RRI2Q12348 ADH1YOL086C 1047 nt11.36□□□□□ -0.59
RRI2Q12348 RAD51YER095W 1203 nt11.35□□□□□ -0.59
RRI2Q12348 IRC24YIR036C 792 nt11.34□□□□□ -0.59
RRI2Q12348 FUN14YAL008W 597 nt11.34□□□□□ -0.59
RRI2Q12348 SAM35YHR083W 990 nt11.33□□□□□ -0.6
RRI2Q12348 YJL195CYJL195C 702 nt11.33□□□□□ -0.6
RRI2Q12348 LOT5YKL183W 921 nt11.33□□□□□ -0.6
RRI2Q12348 STE4YOR212W 1272 nt11.32□□□□□ -0.6
RRI2Q12348 PRM5YIL117C 957 nt11.31□□□□□ -0.6
RRI2Q12348 YLR349WYLR349W 507 nt11.3□□□□□ -0.6
RRI2Q12348 BOR1YNL275W 1731 nt11.29□□□□□ -0.6
RRI2Q12348 FCY21YER060W 1587 nt11.29□□□□□ -0.6
RRI2Q12348 YNR029CYNR029C 1290 nt11.29□□□□□ -0.6
RRI2Q12348 SED1YDR077W 1017 nt11.26□□□□□ -0.61
RRI2Q12348 SMM1YNR015W 1155 nt11.25□□□□□ -0.61
RRI2Q12348 AAC1YMR056C 930 nt11.24□□□□□ -0.61
RRI2Q12348 APT2YDR441C 546 nt11.23□□□□□ -0.61
RRI2Q12348 YER190C-AYER190C-A 576 nt11.23□□□□□ -0.61
RRI2Q12348 YGR296C-AYGR296C-A 576 nt11.23□□□□□ -0.61
RRI2Q12348 YML133W-AYML133W-A 576 nt11.23□□□□□ -0.61
RRI2Q12348 YNL339W-AYNL339W-A 576 nt11.23□□□□□ -0.61
RRI2Q12348 YPL283W-AYPL283W-A 576 nt11.23□□□□□ -0.61
RRI2Q12348 SNF1YDR477W 1902 nt11.21□□□□□ -0.61
RRI2Q12348 DBP1YPL119C 1854 nt11.19□□□□□ -0.62
RRI2Q12348 LIP1YMR298W 453 nt11.19□□□□□ -0.62
RRI2Q12348 FRE6YLL051C 2139 nt11.18□□□□□ -0.62
RRI2Q12348 UGA4YDL210W 1716 nt11.18□□□□□ -0.62
RRI2Q12348 LSB3YFR024C-A 1380 nt11.17□□□□□ -0.62
RRI2Q12348 YEL008WYEL008W 381 nt11.17□□□□□ -0.62
RRI2Q12348 ALD4YOR374W 1560 nt11.16□□□□□ -0.62
RRI2Q12348 PRY1YJL079C 900 nt11.15□□□□□ -0.62
RRI2Q12348 HXT12YIL170W 1374 nt11.15□□□□□ -0.63
RRI2Q12348 ADH7YCR105W 1086 nt11.14□□□□□ -0.63
RRI2Q12348 YPL251WYPL251W 303 nt11.13□□□□□ -0.63
RRI2Q12348 YBL086CYBL086C 1401 nt11.12□□□□□ -0.63
RRI2Q12348 HXT1YHR094C 1713 nt11.12□□□□□ -0.63
RRI2Q12348 RIB2YOL066C 1776 nt11.11□□□□□ -0.63
RRI2Q12348 LEU9YOR108W 1815 nt11.1□□□□□ -0.63
RRI2Q12348 PAU15YIR041W 375 nt11.1□□□□□ -0.63
RRI2Q12348 HIF1YLL022C 1158 nt11.1□□□□□ -0.63
RRI2Q12348 BRR1YPR057W 1026 nt11.06□□□□□ -0.64
RRI2Q12348 VRG4YGL225W 1014 nt11.05□□□□□ -0.64
RRI2Q12348 CPD1YGR247W 720 nt11.05□□□□□ -0.64
RRI2Q12348 GPN2YOR262W 1044 nt11.05□□□□□ -0.64
RRI2Q12348 MEP3YPR138C 1470 nt11.03□□□□□ -0.64
RRI2Q12348 BIO5YNR056C 1686 nt11.01□□□□□ -0.65
RRI2Q12348 CSM1YCR086W 573 nt11.01□□□□□ -0.65
RRI2Q12348 YMR103CYMR103C 363 nt11.01□□□□□ -0.65
RRI2Q12348 YJL055WYJL055W 738 nt11□□□□□ -0.65
RRI2Q12348 TOA2YKL058W 369 nt11□□□□□ -0.65
RRI2Q12348 SHY1YGR112W 1170 nt10.97□□□□□ -0.65
RRI2Q12348 UFO1YML088W 2007 nt10.96□□□□□ -0.65
RRI2Q12348 ESS1YJR017C 513 nt10.95□□□□□ -0.66
RRI2Q12348 TRT2tT(CGU)K 72 nt10.94□□□□□ -0.66
RRI2Q12348 SSN3YPL042C 1668 nt10.93□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms