Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 RPL4AYBR031W 1089 nt11.53□□□□□ -0.56
UFD2P54860 UME6YDR207C 2511 nt11.53□□□□□ -0.56
UFD2P54860 LSC2YGR244C 1284 nt11.52□□□□□ -0.57
UFD2P54860 PRO1YDR300C 1287 nt11.51□□□□□ -0.57
UFD2P54860 RBG2YGR173W 1107 nt11.49□□□□□ -0.57
UFD2P54860 PEX2YJL210W 816 nt11.49□□□□□ -0.57
UFD2P54860 RTN2YDL204W 1182 nt11.48□□□□□ -0.57
UFD2P54860 RPS14BYJL191W 417 nt11.48□□□□□ -0.57
UFD2P54860 YML089CYML089C 369 nt11.48□□□□□ -0.57
UFD2P54860 ARP6YLR085C 1317 nt11.48□□□□□ -0.57
UFD2P54860 HIP1YGR191W 1812 nt11.48□□□□□ -0.57
UFD2P54860 CLB6YGR109C 1143 nt11.47□□□□□ -0.57
UFD2P54860 UTH1YKR042W 1098 nt11.45□□□□□ -0.58
UFD2P54860 HSP60YLR259C 1719 nt11.44□□□□□ -0.58
UFD2P54860 ATG15YCR068W 1563 nt11.44□□□□□ -0.58
UFD2P54860 YKR005CYKR005C 1578 nt11.43□□□□□ -0.58
UFD2P54860 CSM2YIL132C 642 nt11.42□□□□□ -0.58
UFD2P54860 YMR226CYMR226C 804 nt11.41□□□□□ -0.58
UFD2P54860 TIF6YPR016C 738 nt11.41□□□□□ -0.58
UFD2P54860 PLB1YMR008C 1995 nt11.41□□□□□ -0.58
UFD2P54860 YGR259CYGR259C 441 nt11.4□□□□□ -0.58
UFD2P54860 GAP1YKR039W 1809 nt11.39□□□□□ -0.59
UFD2P54860 NRT1YOR071C 1797 nt11.39□□□□□ -0.59
UFD2P54860 SDH5YOL071W 489 nt11.38□□□□□ -0.59
UFD2P54860 PRP4YPR178W 1398 nt11.37□□□□□ -0.59
UFD2P54860 MET28YIR017C 564 nt11.36□□□□□ -0.59
UFD2P54860 YLR111WYLR111W 333 nt11.36□□□□□ -0.59
UFD2P54860 TSC10YBR265W 963 nt11.32□□□□□ -0.6
UFD2P54860 RAD23YEL037C 1197 nt11.3□□□□□ -0.6
UFD2P54860 DPS1YLL018C 1674 nt11.3□□□□□ -0.6
UFD2P54860 YGR012WYGR012W 1182 nt11.29□□□□□ -0.6
UFD2P54860 CAB5YDR196C 726 nt11.26□□□□□ -0.61
UFD2P54860 BMT6YLR063W 1098 nt11.26□□□□□ -0.61
UFD2P54860 YLR279WYLR279W 390 nt11.26□□□□□ -0.61
UFD2P54860 UTR1YJR049C 1593 nt11.25□□□□□ -0.61
UFD2P54860 DIF1YLR437C 402 nt11.24□□□□□ -0.61
UFD2P54860 FIT3YOR383C 615 nt11.24□□□□□ -0.61
UFD2P54860 YLR437C-AYLR437C-A 228 nt11.23□□□□□ -0.61
UFD2P54860 MET8YBR213W 825 nt11.22□□□□□ -0.61
UFD2P54860 ALG12YNR030W 1656 nt11.21□□□□□ -0.61
UFD2P54860 MSB4YOL112W 1479 nt11.2□□□□□ -0.62
UFD2P54860 RIB3YDR487C 627 nt11.18□□□□□ -0.62
UFD2P54860 YAR028WYAR028W 705 nt11.18□□□□□ -0.62
UFD2P54860 SAM1YLR180W 1149 nt11.18□□□□□ -0.62
UFD2P54860 MCH5YOR306C 1566 nt11.18□□□□□ -0.62
UFD2P54860 IRC24YIR036C 792 nt11.17□□□□□ -0.62
UFD2P54860 PRM5YIL117C 957 nt11.15□□□□□ -0.62
UFD2P54860 ZTA1YBR046C 1005 nt11.15□□□□□ -0.62
UFD2P54860 AAC1YMR056C 930 nt11.14□□□□□ -0.63
UFD2P54860 SNF1YDR477W 1902 nt11.13□□□□□ -0.63
UFD2P54860 MTG2YHR168W 1557 nt11.13□□□□□ -0.63
UFD2P54860 ALP1YNL270C 1722 nt11.12□□□□□ -0.63
UFD2P54860 AKR2YOR034C 2250 nt11.11□□□□□ -0.63
UFD2P54860 SAM35YHR083W 990 nt11.09□□□□□ -0.63
UFD2P54860 YPL222C-AYPL222C-A 246 nt11.09□□□□□ -0.63
UFD2P54860 SED1YDR077W 1017 nt11.01□□□□□ -0.65
UFD2P54860 YER190C-AYER190C-A 576 nt11.01□□□□□ -0.65
UFD2P54860 YGR296C-AYGR296C-A 576 nt11.01□□□□□ -0.65
UFD2P54860 YML133W-AYML133W-A 576 nt11.01□□□□□ -0.65
UFD2P54860 YNL339W-AYNL339W-A 576 nt11.01□□□□□ -0.65
UFD2P54860 YPL283W-AYPL283W-A 576 nt11.01□□□□□ -0.65
UFD2P54860 PAU21YOR394W 495 nt11□□□□□ -0.65
UFD2P54860 PAU22YPL282C 495 nt11□□□□□ -0.65
UFD2P54860 GND1YHR183W 1470 nt11□□□□□ -0.65
UFD2P54860 LOT5YKL183W 921 nt10.98□□□□□ -0.65
UFD2P54860 ALD4YOR374W 1560 nt10.98□□□□□ -0.65
UFD2P54860 DBP1YPL119C 1854 nt10.95□□□□□ -0.66
UFD2P54860 BIO5YNR056C 1686 nt10.95□□□□□ -0.66
UFD2P54860 FCY21YER060W 1587 nt10.95□□□□□ -0.66
UFD2P54860 LIP1YMR298W 453 nt10.95□□□□□ -0.66
UFD2P54860 HIF1YLL022C 1158 nt10.94□□□□□ -0.66
UFD2P54860 YPI1YFR003C 468 nt10.93□□□□□ -0.66
UFD2P54860 ADH1YOL086C 1047 nt10.93□□□□□ -0.66
UFD2P54860 SMM1YNR015W 1155 nt10.92□□□□□ -0.66
UFD2P54860 UGA4YDL210W 1716 nt10.91□□□□□ -0.66
UFD2P54860 HXT1YHR094C 1713 nt10.9□□□□□ -0.66
UFD2P54860 YPL251WYPL251W 303 nt10.9□□□□□ -0.66
UFD2P54860 ARO7YPR060C 771 nt10.9□□□□□ -0.66
UFD2P54860 YBL086CYBL086C 1401 nt10.9□□□□□ -0.66
UFD2P54860 APT2YDR441C 546 nt10.89□□□□□ -0.67
UFD2P54860 YJL195CYJL195C 702 nt10.89□□□□□ -0.67
UFD2P54860 RAD51YER095W 1203 nt10.88□□□□□ -0.67
UFD2P54860 YNR029CYNR029C 1290 nt10.88□□□□□ -0.67
UFD2P54860 FUN14YAL008W 597 nt10.86□□□□□ -0.67
UFD2P54860 PRY1YJL079C 900 nt10.86□□□□□ -0.67
UFD2P54860 LEU9YOR108W 1815 nt10.84□□□□□ -0.67
UFD2P54860 STE4YOR212W 1272 nt10.84□□□□□ -0.67
UFD2P54860 NAR1YNL240C 1476 nt10.84□□□□□ -0.67
UFD2P54860 LSB3YFR024C-A 1380 nt10.83□□□□□ -0.68
UFD2P54860 YLR349WYLR349W 507 nt10.83□□□□□ -0.68
UFD2P54860 BRR1YPR057W 1026 nt10.83□□□□□ -0.68
UFD2P54860 MEP3YPR138C 1470 nt10.81□□□□□ -0.68
UFD2P54860 TOA2YKL058W 369 nt10.79□□□□□ -0.68
UFD2P54860 YMR103CYMR103C 363 nt10.79□□□□□ -0.68
UFD2P54860 RIB2YOL066C 1776 nt10.78□□□□□ -0.68
UFD2P54860 HXT12YIL170W 1374 nt10.77□□□□□ -0.68
UFD2P54860 SHY1YGR112W 1170 nt10.77□□□□□ -0.69
UFD2P54860 UFO1YML088W 2007 nt10.74□□□□□ -0.69
UFD2P54860 YEL008WYEL008W 381 nt10.73□□□□□ -0.69
UFD2P54860 CSM1YCR086W 573 nt10.72□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 97 ms