Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 YLR349WYLR349W 507 nt13.28□□□□□ -0.28
RCM1P53972 YNR029CYNR029C 1290 nt13.28□□□□□ -0.28
RCM1P53972 TSC10YBR265W 963 nt13.28□□□□□ -0.28
RCM1P53972 STE4YOR212W 1272 nt13.27□□□□□ -0.29
RCM1P53972 RIB3YDR487C 627 nt13.26□□□□□ -0.29
RCM1P53972 RPM1RPM1 483 nt13.26□□□□□ -0.29
RCM1P53972 NRT1YOR071C 1797 nt13.25□□□□□ -0.29
RCM1P53972 PRO1YDR300C 1287 nt13.25□□□□□ -0.29
RCM1P53972 STR3YGL184C 1398 nt13.24□□□□□ -0.29
RCM1P53972 DUS1YML080W 1272 nt13.24□□□□□ -0.29
RCM1P53972 RDN18-1RDN18-1 1800 nt13.23□□□□□ -0.29
RCM1P53972 RDN18-2RDN18-2 1800 nt13.23□□□□□ -0.29
RCM1P53972 AQY2YLL052C 450 nt13.23□□□□□ -0.29
RCM1P53972 YLR279WYLR279W 390 nt13.21□□□□□ -0.29
RCM1P53972 TIF6YPR016C 738 nt13.21□□□□□ -0.29
RCM1P53972 YML089CYML089C 369 nt13.19□□□□□ -0.3
RCM1P53972 FUN14YAL008W 597 nt13.17□□□□□ -0.3
RCM1P53972 LSC2YGR244C 1284 nt13.16□□□□□ -0.3
RCM1P53972 MET28YIR017C 564 nt13.16□□□□□ -0.3
RCM1P53972 MSB4YOL112W 1479 nt13.16□□□□□ -0.3
RCM1P53972 ATG15YCR068W 1563 nt13.15□□□□□ -0.3
RCM1P53972 YJL195CYJL195C 702 nt13.14□□□□□ -0.31
RCM1P53972 ADH7YCR105W 1086 nt13.12□□□□□ -0.31
RCM1P53972 ADH1YOL086C 1047 nt13.11□□□□□ -0.31
RCM1P53972 PAU15YIR041W 375 nt13.09□□□□□ -0.31
RCM1P53972 YCL074WYCL074W 927 nt13.08□□□□□ -0.32
RCM1P53972 YPL222C-AYPL222C-A 246 nt13.05□□□□□ -0.32
RCM1P53972 ARP6YLR085C 1317 nt13.05□□□□□ -0.32
RCM1P53972 FIT3YOR383C 615 nt13.01□□□□□ -0.33
RCM1P53972 GPN2YOR262W 1044 nt12.99□□□□□ -0.33
RCM1P53972 GAP1YKR039W 1809 nt12.99□□□□□ -0.33
RCM1P53972 PAC11YDR488C 1602 nt12.99□□□□□ -0.33
RCM1P53972 YPI1YFR003C 468 nt12.98□□□□□ -0.33
RCM1P53972 LOT5YKL183W 921 nt12.97□□□□□ -0.33
RCM1P53972 AAC1YMR056C 930 nt12.96□□□□□ -0.33
RCM1P53972 GND1YHR183W 1470 nt12.96□□□□□ -0.34
RCM1P53972 YEL008WYEL008W 381 nt12.93□□□□□ -0.34
RCM1P53972 PLB1YMR008C 1995 nt12.92□□□□□ -0.34
RCM1P53972 ZTA1YBR046C 1005 nt12.91□□□□□ -0.34
RCM1P53972 APT2YDR441C 546 nt12.88□□□□□ -0.35
RCM1P53972 RTN2YDL204W 1182 nt12.86□□□□□ -0.35
RCM1P53972 CPD1YGR247W 720 nt12.86□□□□□ -0.35
RCM1P53972 FUR4YBR021W 1902 nt12.86□□□□□ -0.35
RCM1P53972 ESS1YJR017C 513 nt12.85□□□□□ -0.35
RCM1P53972 DIF1YLR437C 402 nt12.85□□□□□ -0.35
RCM1P53972 MTG2YHR168W 1557 nt12.83□□□□□ -0.36
RCM1P53972 SMM1YNR015W 1155 nt12.83□□□□□ -0.36
RCM1P53972 YAR028WYAR028W 705 nt12.82□□□□□ -0.36
RCM1P53972 ALP1YNL270C 1722 nt12.81□□□□□ -0.36
RCM1P53972 AKR2YOR034C 2250 nt12.8□□□□□ -0.36
RCM1P53972 tS(GCU)LtS(GCU)L 80 nt12.79□□□□□ -0.36
RCM1P53972 UTR1YJR049C 1593 nt12.77□□□□□ -0.37
RCM1P53972 RIB2YOL066C 1776 nt12.76□□□□□ -0.37
RCM1P53972 FCY21YER060W 1587 nt12.75□□□□□ -0.37
RCM1P53972 LSB3YFR024C-A 1380 nt12.72□□□□□ -0.37
RCM1P53972 PRY1YJL079C 900 nt12.66□□□□□ -0.38
RCM1P53972 UGA4YDL210W 1716 nt12.65□□□□□ -0.38
RCM1P53972 YER190C-AYER190C-A 576 nt12.64□□□□□ -0.39
RCM1P53972 YGR296C-AYGR296C-A 576 nt12.64□□□□□ -0.39
RCM1P53972 YML133W-AYML133W-A 576 nt12.64□□□□□ -0.39
RCM1P53972 YNL339W-AYNL339W-A 576 nt12.64□□□□□ -0.39
RCM1P53972 YPL283W-AYPL283W-A 576 nt12.64□□□□□ -0.39
RCM1P53972 HXT12YIL170W 1374 nt12.64□□□□□ -0.39
RCM1P53972 SEN2YLR105C 1134 nt12.63□□□□□ -0.39
RCM1P53972 YKR005CYKR005C 1578 nt12.62□□□□□ -0.39
RCM1P53972 YGR259CYGR259C 441 nt12.62□□□□□ -0.39
RCM1P53972 PUP1YOR157C 786 nt12.61□□□□□ -0.39
RCM1P53972 PGC1YPL206C 966 nt12.61□□□□□ -0.39
RCM1P53972 ALD4YOR374W 1560 nt12.59□□□□□ -0.39
RCM1P53972 VRG4YGL225W 1014 nt12.58□□□□□ -0.4
RCM1P53972 YJL055WYJL055W 738 nt12.58□□□□□ -0.4
RCM1P53972 NVJ2YPR091C 2313 nt12.56□□□□□ -0.4
RCM1P53972 SED1YDR077W 1017 nt12.55□□□□□ -0.4
RCM1P53972 PAU5YFL020C 369 nt12.54□□□□□ -0.4
RCM1P53972 PRM5YIL117C 957 nt12.54□□□□□ -0.4
RCM1P53972 NAP1YKR048C 1254 nt12.54□□□□□ -0.4
RCM1P53972 YBR232CYBR232C 360 nt12.53□□□□□ -0.4
RCM1P53972 YPL251WYPL251W 303 nt12.48□□□□□ -0.41
RCM1P53972 CCT5YJR064W 1689 nt12.47□□□□□ -0.41
RCM1P53972 SAM35YHR083W 990 nt12.45□□□□□ -0.42
RCM1P53972 LIP1YMR298W 453 nt12.45□□□□□ -0.42
RCM1P53972 PRP4YPR178W 1398 nt12.44□□□□□ -0.42
RCM1P53972 CSM1YCR086W 573 nt12.43□□□□□ -0.42
RCM1P53972 YJL064WYJL064W 396 nt12.43□□□□□ -0.42
RCM1P53972 STP3YLR375W 1032 nt12.43□□□□□ -0.42
RCM1P53972 HSP60YLR259C 1719 nt12.41□□□□□ -0.42
RCM1P53972 DBP1YPL119C 1854 nt12.4□□□□□ -0.42
RCM1P53972 YBL086CYBL086C 1401 nt12.39□□□□□ -0.43
RCM1P53972 YMR103CYMR103C 363 nt12.38□□□□□ -0.43
RCM1P53972 MEP3YPR138C 1470 nt12.38□□□□□ -0.43
RCM1P53972 DPS1YLL018C 1674 nt12.38□□□□□ -0.43
RCM1P53972 PAU19YMR325W 375 nt12.36□□□□□ -0.43
RCM1P53972 GAL3YDR009W 1563 nt12.35□□□□□ -0.43
RCM1P53972 BRR1YPR057W 1026 nt12.35□□□□□ -0.43
RCM1P53972 LEU9YOR108W 1815 nt12.34□□□□□ -0.43
RCM1P53972 YJL118WYJL118W 660 nt12.33□□□□□ -0.44
RCM1P53972 THI72YOR192C 1800 nt12.32□□□□□ -0.44
RCM1P53972 SAM3YPL274W 1764 nt12.32□□□□□ -0.44
RCM1P53972 HXT1YHR094C 1713 nt12.31□□□□□ -0.44
RCM1P53972 BMT6YLR063W 1098 nt12.3□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 1049 ms