Protein–RNA interactions for Protein: P53081

NIF3, NGG1-interacting factor 3, yeastyeast

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIF3P53081 PRO1YDR300C 1287 nt8.45□□□□□ -1.06
NIF3P53081 SHH4YLR164W 507 nt8.45□□□□□ -1.06
NIF3P53081 VPS75YNL246W 795 nt8.44□□□□□ -1.06
NIF3P53081 RIM8YGL045W 1629 nt8.41□□□□□ -1.06
NIF3P53081 YJL067WYJL067W 351 nt8.41□□□□□ -1.06
NIF3P53081 ATG15YCR068W 1563 nt8.4□□□□□ -1.06
NIF3P53081 MUP1YGR055W 1725 nt8.39□□□□□ -1.07
NIF3P53081 YFL066CYFL066C 1179 nt8.38□□□□□ -1.07
NIF3P53081 POM34YLR018C 900 nt8.38□□□□□ -1.07
NIF3P53081 HXT1YHR094C 1713 nt8.36□□□□□ -1.07
NIF3P53081 PAU7YAR020C 168 nt8.34□□□□□ -1.07
NIF3P53081 DIF1YLR437C 402 nt8.33□□□□□ -1.08
NIF3P53081 YML089CYML089C 369 nt8.33□□□□□ -1.08
NIF3P53081 DBP1YPL119C 1854 nt8.33□□□□□ -1.08
NIF3P53081 HOL1YNR055C 1761 nt8.33□□□□□ -1.08
NIF3P53081 YHL019W-AYHL019W-A 594 nt8.32□□□□□ -1.08
NIF3P53081 YGL114WYGL114W 2178 nt8.31□□□□□ -1.08
NIF3P53081 YNL024CYNL024C 741 nt8.31□□□□□ -1.08
NIF3P53081 SHY1YGR112W 1170 nt8.3□□□□□ -1.08
NIF3P53081 GID7YCL039W 2238 nt8.3□□□□□ -1.08
NIF3P53081 TOM6YOR045W 186 nt8.29□□□□□ -1.08
NIF3P53081 MET2YNL277W 1461 nt8.28□□□□□ -1.08
NIF3P53081 SFA1YDL168W 1161 nt8.28□□□□□ -1.08
NIF3P53081 ILV3YJR016C 1758 nt8.27□□□□□ -1.08
NIF3P53081 YDR010CYDR010C 333 nt8.27□□□□□ -1.09
NIF3P53081 YOR325WYOR325W 474 nt8.27□□□□□ -1.09
NIF3P53081 SFP1YLR403W 2052 nt8.26□□□□□ -1.09
NIF3P53081 RET2YFR051C 1641 nt8.25□□□□□ -1.09
NIF3P53081 YIL100C-AYIL100C-A 339 nt8.25□□□□□ -1.09
NIF3P53081 SHB17YKR043C 816 nt8.25□□□□□ -1.09
NIF3P53081 YBL086CYBL086C 1401 nt8.24□□□□□ -1.09
NIF3P53081 ADO1YJR105W 1023 nt8.24□□□□□ -1.09
NIF3P53081 LIP1YMR298W 453 nt8.24□□□□□ -1.09
NIF3P53081 PRE6YOL038W 765 nt8.24□□□□□ -1.09
NIF3P53081 CWC15YDR163W 528 nt8.22□□□□□ -1.09
NIF3P53081 YFR018CYFR018C 1092 nt8.22□□□□□ -1.09
NIF3P53081 UBX6YJL048C 1191 nt8.22□□□□□ -1.09
NIF3P53081 MRPL8YJL063C 717 nt8.22□□□□□ -1.09
NIF3P53081 SED1YDR077W 1017 nt8.21□□□□□ -1.1
NIF3P53081 YER190C-AYER190C-A 576 nt8.21□□□□□ -1.1
NIF3P53081 YGR296C-AYGR296C-A 576 nt8.21□□□□□ -1.1
NIF3P53081 PEX2YJL210W 816 nt8.21□□□□□ -1.1
NIF3P53081 YML133W-AYML133W-A 576 nt8.21□□□□□ -1.1
NIF3P53081 YNL339W-AYNL339W-A 576 nt8.21□□□□□ -1.1
NIF3P53081 YPL283W-AYPL283W-A 576 nt8.21□□□□□ -1.1
NIF3P53081 TIF6YPR016C 738 nt8.21□□□□□ -1.1
NIF3P53081 YAR028WYAR028W 705 nt8.2□□□□□ -1.1
NIF3P53081 ESBP6YNL125C 2022 nt8.2□□□□□ -1.1
NIF3P53081 MRP20YDR405W 792 nt8.19□□□□□ -1.1
NIF3P53081 URA6YKL024C 615 nt8.18□□□□□ -1.1
NIF3P53081 MAE1YKL029C 2010 nt8.18□□□□□ -1.1
NIF3P53081 SAM1YLR180W 1149 nt8.17□□□□□ -1.1
NIF3P53081 COQ8YGL119W 1506 nt8.17□□□□□ -1.1
NIF3P53081 PHO89YBR296C 1725 nt8.17□□□□□ -1.1
NIF3P53081 NPP1YCR026C 2229 nt8.16□□□□□ -1.1
NIF3P53081 HIS2YFR025C 1008 nt8.16□□□□□ -1.1
NIF3P53081 OPI10YOL032W 741 nt8.16□□□□□ -1.1
NIF3P53081 HIP1YGR191W 1812 nt8.15□□□□□ -1.1
NIF3P53081 CCT2YIL142W 1584 nt8.15□□□□□ -1.1
NIF3P53081 YMR209CYMR209C 1374 nt8.14□□□□□ -1.11
NIF3P53081 UFO1YML088W 2007 nt8.14□□□□□ -1.11
NIF3P53081 TOA2YKL058W 369 nt8.14□□□□□ -1.11
NIF3P53081 MIR1YJR077C 936 nt8.13□□□□□ -1.11
NIF3P53081 MTG2YHR168W 1557 nt8.13□□□□□ -1.11
NIF3P53081 ARO8YGL202W 1503 nt8.13□□□□□ -1.11
NIF3P53081 UBA4YHR111W 1323 nt8.12□□□□□ -1.11
NIF3P53081 OYE3YPL171C 1203 nt8.12□□□□□ -1.11
NIF3P53081 BET2YPR176C 978 nt8.12□□□□□ -1.11
NIF3P53081 UGP1YKL035W 1500 nt8.12□□□□□ -1.11
NIF3P53081 LEU9YOR108W 1815 nt8.11□□□□□ -1.11
NIF3P53081 MET28YIR017C 564 nt8.11□□□□□ -1.11
NIF3P53081 BRR1YPR057W 1026 nt8.11□□□□□ -1.11
NIF3P53081 AKR2YOR034C 2250 nt8.11□□□□□ -1.11
NIF3P53081 KES1YPL145C 1305 nt8.1□□□□□ -1.11
NIF3P53081 PET8YNL003C 855 nt8.1□□□□□ -1.11
NIF3P53081 YPL251WYPL251W 303 nt8.1□□□□□ -1.11
NIF3P53081 COQ2YNR041C 1119 nt8.09□□□□□ -1.11
NIF3P53081 HMG2YLR450W 3138 nt8.08□□□□□ -1.12
NIF3P53081 GND2YGR256W 1479 nt8.08□□□□□ -1.12
NIF3P53081 ZTA1YBR046C 1005 nt8.08□□□□□ -1.12
NIF3P53081 YSR3YKR053C 1215 nt8.07□□□□□ -1.12
NIF3P53081 NRT1YOR071C 1797 nt8.07□□□□□ -1.12
NIF3P53081 TPO4YOR273C 1980 nt8.06□□□□□ -1.12
NIF3P53081 SGA1YIL099W 1650 nt8.06□□□□□ -1.12
NIF3P53081 RRT5YFR032C 870 nt8.06□□□□□ -1.12
NIF3P53081 RFC1YOR217W 2586 nt8.06□□□□□ -1.12
NIF3P53081 TRT2tT(CGU)K 72 nt8.05□□□□□ -1.12
NIF3P53081 SPP2YOR148C 558 nt8.05□□□□□ -1.12
NIF3P53081 ALP1YNL270C 1722 nt8.05□□□□□ -1.12
NIF3P53081 LSB6YJL100W 1824 nt8.05□□□□□ -1.12
NIF3P53081 YCR087WYCR087W 516 nt8.03□□□□□ -1.12
NIF3P53081 UTH1YKR042W 1098 nt8.03□□□□□ -1.12
NIF3P53081 SAM2YDR502C 1155 nt8.02□□□□□ -1.13
NIF3P53081 RSC8YFR037C 1674 nt8.02□□□□□ -1.13
NIF3P53081 ACO2YJL200C 2370 nt8.02□□□□□ -1.13
NIF3P53081 MEP3YPR138C 1470 nt8.01□□□□□ -1.13
NIF3P53081 UGA4YDL210W 1716 nt8.01□□□□□ -1.13
NIF3P53081 DTR1YBR180W 1719 nt8.01□□□□□ -1.13
NIF3P53081 THI74YDR438W 1113 nt8.01□□□□□ -1.13
NIF3P53081 CLB6YGR109C 1143 nt8.01□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms