Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 POM34YLR018C 900 nt8.92□□□□□ -0.98
SHO1P40073 YML089CYML089C 369 nt8.91□□□□□ -0.98
SHO1P40073 YMR244WYMR244W 1068 nt8.91□□□□□ -0.98
SHO1P40073 RTN2YDL204W 1182 nt8.9□□□□□ -0.98
SHO1P40073 RPL4BYDR012W 1089 nt8.88□□□□□ -0.99
SHO1P40073 RPL4AYBR031W 1089 nt8.88□□□□□ -0.99
SHO1P40073 CLB6YGR109C 1143 nt8.87□□□□□ -0.99
SHO1P40073 YKR005CYKR005C 1578 nt8.86□□□□□ -0.99
SHO1P40073 PRO1YDR300C 1287 nt8.86□□□□□ -0.99
SHO1P40073 TOM6YOR045W 186 nt8.85□□□□□ -0.99
SHO1P40073 YGR259CYGR259C 441 nt8.84□□□□□ -0.99
SHO1P40073 HIP1YGR191W 1812 nt8.84□□□□□ -0.99
SHO1P40073 PRP4YPR178W 1398 nt8.84□□□□□ -0.99
SHO1P40073 UTH1YKR042W 1098 nt8.83□□□□□ -1
SHO1P40073 RPS14BYJL191W 417 nt8.82□□□□□ -1
SHO1P40073 PLB1YMR008C 1995 nt8.81□□□□□ -1
SHO1P40073 GAP1YKR039W 1809 nt8.8□□□□□ -1
SHO1P40073 TIF6YPR016C 738 nt8.8□□□□□ -1
SHO1P40073 ATG15YCR068W 1563 nt8.8□□□□□ -1
SHO1P40073 PEX2YJL210W 816 nt8.79□□□□□ -1
SHO1P40073 YMR226CYMR226C 804 nt8.79□□□□□ -1
SHO1P40073 DPS1YLL018C 1674 nt8.78□□□□□ -1
SHO1P40073 MET28YIR017C 564 nt8.78□□□□□ -1
SHO1P40073 BMT6YLR063W 1098 nt8.77□□□□□ -1.01
SHO1P40073 NRT1YOR071C 1797 nt8.76□□□□□ -1.01
SHO1P40073 RBG2YGR173W 1107 nt8.76□□□□□ -1.01
SHO1P40073 ALG12YNR030W 1656 nt8.75□□□□□ -1.01
SHO1P40073 IRC24YIR036C 792 nt8.73□□□□□ -1.01
SHO1P40073 TSC10YBR265W 963 nt8.73□□□□□ -1.01
SHO1P40073 RAD23YEL037C 1197 nt8.71□□□□□ -1.02
SHO1P40073 FIT3YOR383C 615 nt8.71□□□□□ -1.02
SHO1P40073 YLR111WYLR111W 333 nt8.69□□□□□ -1.02
SHO1P40073 AAC1YMR056C 930 nt8.69□□□□□ -1.02
SHO1P40073 DIF1YLR437C 402 nt8.68□□□□□ -1.02
SHO1P40073 SDH5YOL071W 489 nt8.68□□□□□ -1.02
SHO1P40073 UTR1YJR049C 1593 nt8.68□□□□□ -1.02
SHO1P40073 HSL7YBR133C 2484 nt8.66□□□□□ -1.02
SHO1P40073 YGR012WYGR012W 1182 nt8.65□□□□□ -1.02
SHO1P40073 FRE6YLL051C 2139 nt8.64□□□□□ -1.03
SHO1P40073 YLR279WYLR279W 390 nt8.64□□□□□ -1.03
SHO1P40073 RDN25-1RDN25-1 3396 nt8.64□□□□□ -1.03
SHO1P40073 RDN25-2RDN25-2 3396 nt8.64□□□□□ -1.03
SHO1P40073 YAR028WYAR028W 705 nt8.63□□□□□ -1.03
SHO1P40073 SNF1YDR477W 1902 nt8.62□□□□□ -1.03
SHO1P40073 RIB3YDR487C 627 nt8.61□□□□□ -1.03
SHO1P40073 SAM35YHR083W 990 nt8.61□□□□□ -1.03
SHO1P40073 ALP1YNL270C 1722 nt8.6□□□□□ -1.03
SHO1P40073 YLR437C-AYLR437C-A 228 nt8.6□□□□□ -1.03
SHO1P40073 MTG2YHR168W 1557 nt8.59□□□□□ -1.03
SHO1P40073 PRM5YIL117C 957 nt8.58□□□□□ -1.04
SHO1P40073 MSB4YOL112W 1479 nt8.57□□□□□ -1.04
SHO1P40073 CAB5YDR196C 726 nt8.55□□□□□ -1.04
SHO1P40073 BIO5YNR056C 1686 nt8.54□□□□□ -1.04
SHO1P40073 YPL222C-AYPL222C-A 246 nt8.54□□□□□ -1.04
SHO1P40073 SAM1YLR180W 1149 nt8.53□□□□□ -1.04
SHO1P40073 ALD4YOR374W 1560 nt8.52□□□□□ -1.04
SHO1P40073 ZTA1YBR046C 1005 nt8.52□□□□□ -1.05
SHO1P40073 AKR2YOR034C 2250 nt8.52□□□□□ -1.05
SHO1P40073 SED1YDR077W 1017 nt8.5□□□□□ -1.05
SHO1P40073 DBP1YPL119C 1854 nt8.5□□□□□ -1.05
SHO1P40073 SSN3YPL042C 1668 nt8.49□□□□□ -1.05
SHO1P40073 HIF1YLL022C 1158 nt8.47□□□□□ -1.05
SHO1P40073 APT2YDR441C 546 nt8.46□□□□□ -1.06
SHO1P40073 YER190C-AYER190C-A 576 nt8.46□□□□□ -1.06
SHO1P40073 YGR296C-AYGR296C-A 576 nt8.46□□□□□ -1.06
SHO1P40073 YML133W-AYML133W-A 576 nt8.46□□□□□ -1.06
SHO1P40073 LIP1YMR298W 453 nt8.46□□□□□ -1.06
SHO1P40073 YNL339W-AYNL339W-A 576 nt8.46□□□□□ -1.06
SHO1P40073 YPL283W-AYPL283W-A 576 nt8.46□□□□□ -1.06
SHO1P40073 FCY21YER060W 1587 nt8.46□□□□□ -1.06
SHO1P40073 GND1YHR183W 1470 nt8.45□□□□□ -1.06
SHO1P40073 GID7YCL039W 2238 nt8.45□□□□□ -1.06
SHO1P40073 HEL2YDR266C 1920 nt8.45□□□□□ -1.06
SHO1P40073 YAT1YAR035W 2064 nt8.44□□□□□ -1.06
SHO1P40073 NAR1YNL240C 1476 nt8.44□□□□□ -1.06
SHO1P40073 HXT1YHR094C 1713 nt8.43□□□□□ -1.06
SHO1P40073 YPI1YFR003C 468 nt8.42□□□□□ -1.06
SHO1P40073 PBP1YGR178C 2169 nt8.42□□□□□ -1.06
SHO1P40073 NPP1YCR026C 2229 nt8.41□□□□□ -1.06
SHO1P40073 SFP1YLR403W 2052 nt8.41□□□□□ -1.06
SHO1P40073 LOT5YKL183W 921 nt8.41□□□□□ -1.06
SHO1P40073 LEU9YOR108W 1815 nt8.4□□□□□ -1.06
SHO1P40073 YBL086CYBL086C 1401 nt8.39□□□□□ -1.07
SHO1P40073 CYT2YKL087C 675 nt8.38□□□□□ -1.07
SHO1P40073 SMM1YNR015W 1155 nt8.37□□□□□ -1.07
SHO1P40073 YPL251WYPL251W 303 nt8.37□□□□□ -1.07
SHO1P40073 ADH1YOL086C 1047 nt8.36□□□□□ -1.07
SHO1P40073 MET2YNL277W 1461 nt8.36□□□□□ -1.07
SHO1P40073 UGA4YDL210W 1716 nt8.35□□□□□ -1.07
SHO1P40073 BRR1YPR057W 1026 nt8.35□□□□□ -1.07
SHO1P40073 CMP2YML057W 1815 nt8.34□□□□□ -1.07
SHO1P40073 YNR029CYNR029C 1290 nt8.34□□□□□ -1.07
SHO1P40073 ZRT3YKL175W 1512 nt8.34□□□□□ -1.08
SHO1P40073 SHY1YGR112W 1170 nt8.33□□□□□ -1.08
SHO1P40073 FUN14YAL008W 597 nt8.32□□□□□ -1.08
SHO1P40073 PRY1YJL079C 900 nt8.31□□□□□ -1.08
SHO1P40073 YJL195CYJL195C 702 nt8.31□□□□□ -1.08
SHO1P40073 HXT12YIL170W 1374 nt8.31□□□□□ -1.08
SHO1P40073 TOA2YKL058W 369 nt8.3□□□□□ -1.08
SHO1P40073 LSB3YFR024C-A 1380 nt8.3□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 27.3 ms