Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 snR78snR78 87 nt13.44□□□□□ -0.26
RTG3P38165 SFA1YDL168W 1161 nt13.44□□□□□ -0.26
RTG3P38165 DUS1YML080W 1272 nt13.43□□□□□ -0.26
RTG3P38165 AI5_BETAQ0075 1065 nt13.42□□□□□ -0.26
RTG3P38165 URH1YDR400W 1023 nt13.42□□□□□ -0.26
RTG3P38165 RBG1YAL036C 1110 nt13.42□□□□□ -0.26
RTG3P38165 RDN18-1RDN18-1 1800 nt13.41□□□□□ -0.26
RTG3P38165 RDN18-2RDN18-2 1800 nt13.41□□□□□ -0.26
RTG3P38165 SKG1YKR100C 1068 nt13.41□□□□□ -0.26
RTG3P38165 YMR244WYMR244W 1068 nt13.41□□□□□ -0.26
RTG3P38165 STR3YGL184C 1398 nt13.41□□□□□ -0.26
RTG3P38165 NBP35YGL091C 987 nt13.4□□□□□ -0.26
RTG3P38165 SHH4YLR164W 507 nt13.4□□□□□ -0.26
RTG3P38165 COQ2YNR041C 1119 nt13.39□□□□□ -0.27
RTG3P38165 NDI1YML120C 1542 nt13.38□□□□□ -0.27
RTG3P38165 YNR068CYNR068C 819 nt13.35□□□□□ -0.27
RTG3P38165 AQY2YLL052C 450 nt13.34□□□□□ -0.27
RTG3P38165 YHL019W-AYHL019W-A 594 nt13.33□□□□□ -0.28
RTG3P38165 HMT1YBR034C 1047 nt13.33□□□□□ -0.28
RTG3P38165 AIM45YPR004C 1035 nt13.33□□□□□ -0.28
RTG3P38165 GLR1YPL091W 1452 nt13.33□□□□□ -0.28
RTG3P38165 YPL071CYPL071C 471 nt13.31□□□□□ -0.28
RTG3P38165 YCL074WYCL074W 927 nt13.3□□□□□ -0.28
RTG3P38165 YCR087WYCR087W 516 nt13.3□□□□□ -0.28
RTG3P38165 FUR4YBR021W 1902 nt13.3□□□□□ -0.28
RTG3P38165 PAC11YDR488C 1602 nt13.28□□□□□ -0.28
RTG3P38165 MRP20YDR405W 792 nt13.27□□□□□ -0.29
RTG3P38165 TIR3YIL011W 810 nt13.24□□□□□ -0.29
RTG3P38165 Q0017Q0017 162 nt13.23□□□□□ -0.29
RTG3P38165 TOM6YOR045W 186 nt13.22□□□□□ -0.29
RTG3P38165 Q0255Q0255 1419 nt13.2□□□□□ -0.3
RTG3P38165 POM34YLR018C 900 nt13.19□□□□□ -0.3
RTG3P38165 YPL168WYPL168W 1293 nt13.18□□□□□ -0.3
RTG3P38165 PRO1YDR300C 1287 nt13.16□□□□□ -0.3
RTG3P38165 YJL118WYJL118W 660 nt13.14□□□□□ -0.31
RTG3P38165 PEX2YJL210W 816 nt13.14□□□□□ -0.31
RTG3P38165 RBG2YGR173W 1107 nt13.13□□□□□ -0.31
RTG3P38165 RPL4BYDR012W 1089 nt13.11□□□□□ -0.31
RTG3P38165 YGL188CYGL188C 174 nt13.11□□□□□ -0.31
RTG3P38165 YNL067W-AYNL067W-A 147 nt13.11□□□□□ -0.31
RTG3P38165 RPL4AYBR031W 1089 nt13.11□□□□□ -0.31
RTG3P38165 RPS14BYJL191W 417 nt13.1□□□□□ -0.31
RTG3P38165 YOR169CYOR169C 465 nt13.1□□□□□ -0.31
RTG3P38165 HIP1YGR191W 1812 nt13.09□□□□□ -0.31
RTG3P38165 ARP6YLR085C 1317 nt13.09□□□□□ -0.31
RTG3P38165 URE2YNL229C 1065 nt13.08□□□□□ -0.32
RTG3P38165 LSC2YGR244C 1284 nt13.07□□□□□ -0.32
RTG3P38165 YHM2YMR241W 945 nt13.07□□□□□ -0.32
RTG3P38165 HSP60YLR259C 1719 nt13.04□□□□□ -0.32
RTG3P38165 ATG15YCR068W 1563 nt13.03□□□□□ -0.32
RTG3P38165 TIF6YPR016C 738 nt13.03□□□□□ -0.32
RTG3P38165 PLB1YMR008C 1995 nt13.03□□□□□ -0.32
RTG3P38165 YML089CYML089C 369 nt13.02□□□□□ -0.33
RTG3P38165 YKR005CYKR005C 1578 nt13.02□□□□□ -0.33
RTG3P38165 CAB5YDR196C 726 nt13.01□□□□□ -0.33
RTG3P38165 AIR1YIL079C 1083 nt13.01□□□□□ -0.33
RTG3P38165 ATP6Q0085 780 nt13□□□□□ -0.33
RTG3P38165 UTH1YKR042W 1098 nt13□□□□□ -0.33
RTG3P38165 RTN2YDL204W 1182 nt12.99□□□□□ -0.33
RTG3P38165 GAP1YKR039W 1809 nt12.98□□□□□ -0.33
RTG3P38165 NRT1YOR071C 1797 nt12.97□□□□□ -0.33
RTG3P38165 YGR259CYGR259C 441 nt12.97□□□□□ -0.33
RTG3P38165 YMR226CYMR226C 804 nt12.96□□□□□ -0.33
RTG3P38165 SDH5YOL071W 489 nt12.96□□□□□ -0.33
RTG3P38165 PRP4YPR178W 1398 nt12.94□□□□□ -0.34
RTG3P38165 MET28YIR017C 564 nt12.92□□□□□ -0.34
RTG3P38165 YLR111WYLR111W 333 nt12.91□□□□□ -0.34
RTG3P38165 KTR3YBR205W 1215 nt12.91□□□□□ -0.34
RTG3P38165 YGR012WYGR012W 1182 nt12.89□□□□□ -0.35
RTG3P38165 DPS1YLL018C 1674 nt12.88□□□□□ -0.35
RTG3P38165 TSC10YBR265W 963 nt12.87□□□□□ -0.35
RTG3P38165 NEM1YHR004C 1341 nt12.87□□□□□ -0.35
RTG3P38165 UTR1YJR049C 1593 nt12.86□□□□□ -0.35
RTG3P38165 YLR279WYLR279W 390 nt12.86□□□□□ -0.35
RTG3P38165 YLR437C-AYLR437C-A 228 nt12.86□□□□□ -0.35
RTG3P38165 RAD23YEL037C 1197 nt12.84□□□□□ -0.35
RTG3P38165 YJL107CYJL107C 1164 nt12.84□□□□□ -0.35
RTG3P38165 DIF1YLR437C 402 nt12.82□□□□□ -0.36
RTG3P38165 MSB4YOL112W 1479 nt12.82□□□□□ -0.36
RTG3P38165 THP3YPR045C 1413 nt12.8□□□□□ -0.36
RTG3P38165 BOR1YNL275W 1731 nt12.8□□□□□ -0.36
RTG3P38165 ZTA1YBR046C 1005 nt12.78□□□□□ -0.36
RTG3P38165 RIB3YDR487C 627 nt12.75□□□□□ -0.37
RTG3P38165 LSM12YHR121W 564 nt12.75□□□□□ -0.37
RTG3P38165 PRM5YIL117C 957 nt12.75□□□□□ -0.37
RTG3P38165 SAM1YLR180W 1149 nt12.75□□□□□ -0.37
RTG3P38165 SNF1YDR477W 1902 nt12.74□□□□□ -0.37
RTG3P38165 YEL074WYEL074W 339 nt12.74□□□□□ -0.37
RTG3P38165 YAL016C-BYAL016C-B 186 nt12.74□□□□□ -0.37
RTG3P38165 FIT3YOR383C 615 nt12.74□□□□□ -0.37
RTG3P38165 BMT6YLR063W 1098 nt12.73□□□□□ -0.37
RTG3P38165 MTG2YHR168W 1557 nt12.73□□□□□ -0.37
RTG3P38165 STD1YOR047C 1335 nt12.71□□□□□ -0.37
RTG3P38165 YAR028WYAR028W 705 nt12.71□□□□□ -0.37
RTG3P38165 RSM23YGL129C 1353 nt12.7□□□□□ -0.38
RTG3P38165 IRC24YIR036C 792 nt12.68□□□□□ -0.38
RTG3P38165 AKR2YOR034C 2250 nt12.67□□□□□ -0.38
RTG3P38165 YER190C-AYER190C-A 576 nt12.65□□□□□ -0.38
RTG3P38165 YGR296C-AYGR296C-A 576 nt12.65□□□□□ -0.38
RTG3P38165 YML133W-AYML133W-A 576 nt12.65□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms