Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YNL115CYNL115C 1935 nt10.44□□□□□ -0.74
MSH1P25846 YJL067WYJL067W 351 nt10.43□□□□□ -0.74
MSH1P25846 ZRT3YKL175W 1512 nt10.43□□□□□ -0.74
MSH1P25846 YFL066CYFL066C 1179 nt10.42□□□□□ -0.74
MSH1P25846 NIT1YIL164C 600 nt10.41□□□□□ -0.74
MSH1P25846 DAT1YML113W 747 nt10.41□□□□□ -0.74
MSH1P25846 YNL024CYNL024C 741 nt10.41□□□□□ -0.74
MSH1P25846 VPS75YNL246W 795 nt10.38□□□□□ -0.75
MSH1P25846 YOR325WYOR325W 474 nt10.38□□□□□ -0.75
MSH1P25846 YMR209CYMR209C 1374 nt10.38□□□□□ -0.75
MSH1P25846 YCR102CYCR102C 1107 nt10.36□□□□□ -0.75
MSH1P25846 TIM17YJL143W 477 nt10.36□□□□□ -0.75
MSH1P25846 NAT4YMR069W 858 nt10.33□□□□□ -0.76
MSH1P25846 SGT2YOR007C 1041 nt10.33□□□□□ -0.76
MSH1P25846 GAP1YKR039W 1809 nt10.3□□□□□ -0.76
MSH1P25846 ACO2YJL200C 2370 nt10.29□□□□□ -0.76
MSH1P25846 PAU7YAR020C 168 nt10.28□□□□□ -0.76
MSH1P25846 ILV3YJR016C 1758 nt10.27□□□□□ -0.77
MSH1P25846 MET2YNL277W 1461 nt10.27□□□□□ -0.77
MSH1P25846 SAM35YHR083W 990 nt10.26□□□□□ -0.77
MSH1P25846 SHH4YLR164W 507 nt10.25□□□□□ -0.77
MSH1P25846 UGP1YKL035W 1500 nt10.23□□□□□ -0.77
MSH1P25846 PRO1YDR300C 1287 nt10.22□□□□□ -0.77
MSH1P25846 THI74YDR438W 1113 nt10.22□□□□□ -0.77
MSH1P25846 COQ8YGL119W 1506 nt10.22□□□□□ -0.77
MSH1P25846 SFP1YLR403W 2052 nt10.21□□□□□ -0.77
MSH1P25846 YIL100C-AYIL100C-A 339 nt10.21□□□□□ -0.77
MSH1P25846 MIR1YJR077C 936 nt10.21□□□□□ -0.77
MSH1P25846 FRE6YLL051C 2139 nt10.21□□□□□ -0.78
MSH1P25846 HXT1YHR094C 1713 nt10.2□□□□□ -0.78
MSH1P25846 MSF1YPR047W 1410 nt10.2□□□□□ -0.78
MSH1P25846 HIS2YFR025C 1008 nt10.19□□□□□ -0.78
MSH1P25846 SHY1YGR112W 1170 nt10.19□□□□□ -0.78
MSH1P25846 DBP1YPL119C 1854 nt10.19□□□□□ -0.78
MSH1P25846 ARO8YGL202W 1503 nt10.17□□□□□ -0.78
MSH1P25846 BET2YPR176C 978 nt10.17□□□□□ -0.78
MSH1P25846 TIR3YIL011W 810 nt10.15□□□□□ -0.78
MSH1P25846 LSC2YGR244C 1284 nt10.14□□□□□ -0.79
MSH1P25846 ATG15YCR068W 1563 nt10.11□□□□□ -0.79
MSH1P25846 KES1YPL145C 1305 nt10.1□□□□□ -0.79
MSH1P25846 CWC15YDR163W 528 nt10.1□□□□□ -0.79
MSH1P25846 CCT2YIL142W 1584 nt10.09□□□□□ -0.79
MSH1P25846 DIF1YLR437C 402 nt10.09□□□□□ -0.79
MSH1P25846 OPI10YOL032W 741 nt10.09□□□□□ -0.79
MSH1P25846 UBA4YHR111W 1323 nt10.08□□□□□ -0.8
MSH1P25846 SHB17YKR043C 816 nt10.08□□□□□ -0.8
MSH1P25846 POM34YLR018C 900 nt10.08□□□□□ -0.8
MSH1P25846 SGA1YIL099W 1650 nt10.08□□□□□ -0.8
MSH1P25846 PSD1YNL169C 1503 nt10.07□□□□□ -0.8
MSH1P25846 MRP20YDR405W 792 nt10.07□□□□□ -0.8
MSH1P25846 SBA1YKL117W 651 nt10.06□□□□□ -0.8
MSH1P25846 YBL086CYBL086C 1401 nt10.06□□□□□ -0.8
MSH1P25846 RET2YFR051C 1641 nt10.05□□□□□ -0.8
MSH1P25846 YER190C-AYER190C-A 576 nt10.05□□□□□ -0.8
MSH1P25846 YGR296C-AYGR296C-A 576 nt10.05□□□□□ -0.8
MSH1P25846 YML133W-AYML133W-A 576 nt10.05□□□□□ -0.8
MSH1P25846 YNL339W-AYNL339W-A 576 nt10.05□□□□□ -0.8
MSH1P25846 YPL283W-AYPL283W-A 576 nt10.05□□□□□ -0.8
MSH1P25846 YSR3YKR053C 1215 nt10.04□□□□□ -0.8
MSH1P25846 LSB6YJL100W 1824 nt10.04□□□□□ -0.8
MSH1P25846 RSC8YFR037C 1674 nt10.03□□□□□ -0.8
MSH1P25846 TPO4YOR273C 1980 nt10.03□□□□□ -0.8
MSH1P25846 YCR087WYCR087W 516 nt10.02□□□□□ -0.81
MSH1P25846 YGL034CYGL034C 366 nt10.02□□□□□ -0.81
MSH1P25846 UGA4YDL210W 1716 nt10.01□□□□□ -0.81
MSH1P25846 YHL008CYHL008C 1884 nt10□□□□□ -0.81
MSH1P25846 ZTA1YBR046C 1005 nt10□□□□□ -0.81
MSH1P25846 YDR010CYDR010C 333 nt9.99□□□□□ -0.81
MSH1P25846 LIP1YMR298W 453 nt9.99□□□□□ -0.81
MSH1P25846 HMG2YLR450W 3138 nt9.98□□□□□ -0.81
MSH1P25846 URA6YKL024C 615 nt9.98□□□□□ -0.81
MSH1P25846 TOM6YOR045W 186 nt9.98□□□□□ -0.81
MSH1P25846 ZAP1YJL056C 2643 nt9.97□□□□□ -0.81
MSH1P25846 PHO89YBR296C 1725 nt9.96□□□□□ -0.81
MSH1P25846 UFO1YML088W 2007 nt9.95□□□□□ -0.82
MSH1P25846 NPP1YCR026C 2229 nt9.95□□□□□ -0.82
MSH1P25846 DMA2YNL116W 1569 nt9.95□□□□□ -0.82
MSH1P25846 YHL019W-AYHL019W-A 594 nt9.94□□□□□ -0.82
MSH1P25846 CYT1YOR065W 930 nt9.94□□□□□ -0.82
MSH1P25846 XYL2YLR070C 1071 nt9.93□□□□□ -0.82
MSH1P25846 SFA1YDL168W 1161 nt9.92□□□□□ -0.82
MSH1P25846 YML089CYML089C 369 nt9.91□□□□□ -0.82
MSH1P25846 QDR2YIL121W 1629 nt9.9□□□□□ -0.82
MSH1P25846 TOA2YKL058W 369 nt9.9□□□□□ -0.82
MSH1P25846 OYE3YPL171C 1203 nt9.9□□□□□ -0.82
MSH1P25846 GLR1YPL091W 1452 nt9.9□□□□□ -0.83
MSH1P25846 SAM1YLR180W 1149 nt9.89□□□□□ -0.83
MSH1P25846 ODC1YPL134C 933 nt9.89□□□□□ -0.83
MSH1P25846 AIM45YPR004C 1035 nt9.89□□□□□ -0.83
MSH1P25846 GND2YGR256W 1479 nt9.88□□□□□ -0.83
MSH1P25846 SED1YDR077W 1017 nt9.88□□□□□ -0.83
MSH1P25846 RBG1YAL036C 1110 nt9.88□□□□□ -0.83
MSH1P25846 SPP2YOR148C 558 nt9.88□□□□□ -0.83
MSH1P25846 ACH1YBL015W 1581 nt9.88□□□□□ -0.83
MSH1P25846 GID8YMR135C 1368 nt9.88□□□□□ -0.83
MSH1P25846 PEX2YJL210W 816 nt9.87□□□□□ -0.83
MSH1P25846 PET8YNL003C 855 nt9.87□□□□□ -0.83
MSH1P25846 FMS1YMR020W 1527 nt9.87□□□□□ -0.83
MSH1P25846 BRR1YPR057W 1026 nt9.86□□□□□ -0.83
MSH1P25846 MRS6YOR370C 1812 nt9.86□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms