Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 YML089CYML089C 369 nt10.94□□□□□ -0.66
SRD1P09007 ARP6YLR085C 1317 nt10.93□□□□□ -0.66
SRD1P09007 RTN2YDL204W 1182 nt10.92□□□□□ -0.66
SRD1P09007 RPS14BYJL191W 417 nt10.92□□□□□ -0.66
SRD1P09007 UTH1YKR042W 1098 nt10.92□□□□□ -0.66
SRD1P09007 HIP1YGR191W 1812 nt10.91□□□□□ -0.66
SRD1P09007 ATG15YCR068W 1563 nt10.9□□□□□ -0.66
SRD1P09007 YMR226CYMR226C 804 nt10.89□□□□□ -0.67
SRD1P09007 YKR005CYKR005C 1578 nt10.87□□□□□ -0.67
SRD1P09007 SDH5YOL071W 489 nt10.87□□□□□ -0.67
SRD1P09007 HSP60YLR259C 1719 nt10.87□□□□□ -0.67
SRD1P09007 YGR259CYGR259C 441 nt10.86□□□□□ -0.67
SRD1P09007 YLR111WYLR111W 333 nt10.86□□□□□ -0.67
SRD1P09007 TIF6YPR016C 738 nt10.86□□□□□ -0.67
SRD1P09007 RDN37-1RDN37-1 5354 nt10.85□□□□□ -0.67
SRD1P09007 RDN37-2RDN37-2 5354 nt10.85□□□□□ -0.67
SRD1P09007 NRT1YOR071C 1797 nt10.85□□□□□ -0.67
SRD1P09007 PLB1YMR008C 1995 nt10.85□□□□□ -0.67
SRD1P09007 GAP1YKR039W 1809 nt10.84□□□□□ -0.67
SRD1P09007 PRP4YPR178W 1398 nt10.82□□□□□ -0.68
SRD1P09007 MET28YIR017C 564 nt10.82□□□□□ -0.68
SRD1P09007 TSC10YBR265W 963 nt10.79□□□□□ -0.68
SRD1P09007 RAD23YEL037C 1197 nt10.77□□□□□ -0.69
SRD1P09007 YGR012WYGR012W 1182 nt10.76□□□□□ -0.69
SRD1P09007 BMT6YLR063W 1098 nt10.75□□□□□ -0.69
SRD1P09007 NME1NME1 340 nt10.75□□□□□ -0.69
SRD1P09007 DPS1YLL018C 1674 nt10.74□□□□□ -0.69
SRD1P09007 BOR1YNL275W 1731 nt10.72□□□□□ -0.69
SRD1P09007 FIT3YOR383C 615 nt10.72□□□□□ -0.69
SRD1P09007 UTR1YJR049C 1593 nt10.7□□□□□ -0.7
SRD1P09007 YLR279WYLR279W 390 nt10.7□□□□□ -0.7
SRD1P09007 DIF1YLR437C 402 nt10.69□□□□□ -0.7
SRD1P09007 CAB5YDR196C 726 nt10.68□□□□□ -0.7
SRD1P09007 YLR437C-AYLR437C-A 228 nt10.68□□□□□ -0.7
SRD1P09007 NVJ2YPR091C 2313 nt10.67□□□□□ -0.7
SRD1P09007 RIB3YDR487C 627 nt10.65□□□□□ -0.7
SRD1P09007 MSB4YOL112W 1479 nt10.65□□□□□ -0.7
SRD1P09007 IRC24YIR036C 792 nt10.64□□□□□ -0.71
SRD1P09007 YAR028WYAR028W 705 nt10.64□□□□□ -0.71
SRD1P09007 SAM1YLR180W 1149 nt10.64□□□□□ -0.71
SRD1P09007 PRM5YIL117C 957 nt10.6□□□□□ -0.71
SRD1P09007 AAC1YMR056C 930 nt10.6□□□□□ -0.71
SRD1P09007 ZTA1YBR046C 1005 nt10.6□□□□□ -0.71
SRD1P09007 AKR2YOR034C 2250 nt10.59□□□□□ -0.71
SRD1P09007 ALP1YNL270C 1722 nt10.59□□□□□ -0.71
SRD1P09007 YPL222C-AYPL222C-A 246 nt10.59□□□□□ -0.71
SRD1P09007 MTG2YHR168W 1557 nt10.58□□□□□ -0.72
SRD1P09007 SAM35YHR083W 990 nt10.58□□□□□ -0.72
SRD1P09007 SNF1YDR477W 1902 nt10.56□□□□□ -0.72
SRD1P09007 SED1YDR077W 1017 nt10.48□□□□□ -0.73
SRD1P09007 YER190C-AYER190C-A 576 nt10.48□□□□□ -0.73
SRD1P09007 YGR296C-AYGR296C-A 576 nt10.48□□□□□ -0.73
SRD1P09007 YML133W-AYML133W-A 576 nt10.48□□□□□ -0.73
SRD1P09007 YNL339W-AYNL339W-A 576 nt10.48□□□□□ -0.73
SRD1P09007 YPL283W-AYPL283W-A 576 nt10.48□□□□□ -0.73
SRD1P09007 GND1YHR183W 1470 nt10.48□□□□□ -0.73
SRD1P09007 LOT5YKL183W 921 nt10.47□□□□□ -0.73
SRD1P09007 ALD4YOR374W 1560 nt10.47□□□□□ -0.73
SRD1P09007 LIP1YMR298W 453 nt10.44□□□□□ -0.74
SRD1P09007 YPI1YFR003C 468 nt10.43□□□□□ -0.74
SRD1P09007 FCY21YER060W 1587 nt10.41□□□□□ -0.74
SRD1P09007 HIF1YLL022C 1158 nt10.41□□□□□ -0.74
SRD1P09007 SMM1YNR015W 1155 nt10.41□□□□□ -0.74
SRD1P09007 DBP1YPL119C 1854 nt10.4□□□□□ -0.74
SRD1P09007 ADH1YOL086C 1047 nt10.4□□□□□ -0.74
SRD1P09007 BIO5YNR056C 1686 nt10.39□□□□□ -0.75
SRD1P09007 HXT1YHR094C 1713 nt10.38□□□□□ -0.75
SRD1P09007 YJL195CYJL195C 702 nt10.38□□□□□ -0.75
SRD1P09007 UGA4YDL210W 1716 nt10.38□□□□□ -0.75
SRD1P09007 APT2YDR441C 546 nt10.37□□□□□ -0.75
SRD1P09007 YBL086CYBL086C 1401 nt10.36□□□□□ -0.75
SRD1P09007 YNR029CYNR029C 1290 nt10.36□□□□□ -0.75
SRD1P09007 YPL251WYPL251W 303 nt10.36□□□□□ -0.75
SRD1P09007 FUN14YAL008W 597 nt10.35□□□□□ -0.75
SRD1P09007 RAD51YER095W 1203 nt10.33□□□□□ -0.76
SRD1P09007 PRY1YJL079C 900 nt10.33□□□□□ -0.76
SRD1P09007 STE4YOR212W 1272 nt10.33□□□□□ -0.76
SRD1P09007 LSB3YFR024C-A 1380 nt10.33□□□□□ -0.76
SRD1P09007 ALG12YNR030W 1656 nt10.32□□□□□ -0.76
SRD1P09007 BRR1YPR057W 1026 nt10.32□□□□□ -0.76
SRD1P09007 LEU9YOR108W 1815 nt10.3□□□□□ -0.76
SRD1P09007 MEP3YPR138C 1470 nt10.3□□□□□ -0.76
SRD1P09007 TOA2YKL058W 369 nt10.29□□□□□ -0.76
SRD1P09007 YLR349WYLR349W 507 nt10.29□□□□□ -0.76
SRD1P09007 YMR103CYMR103C 363 nt10.28□□□□□ -0.76
SRD1P09007 RIB2YOL066C 1776 nt10.26□□□□□ -0.77
SRD1P09007 SHY1YGR112W 1170 nt10.25□□□□□ -0.77
SRD1P09007 HXT12YIL170W 1374 nt10.25□□□□□ -0.77
SRD1P09007 VRG4YGL225W 1014 nt10.23□□□□□ -0.77
SRD1P09007 YEL008WYEL008W 381 nt10.22□□□□□ -0.77
SRD1P09007 GND2YGR256W 1479 nt10.22□□□□□ -0.77
SRD1P09007 YJL055WYJL055W 738 nt10.2□□□□□ -0.78
SRD1P09007 FRE6YLL051C 2139 nt10.2□□□□□ -0.78
SRD1P09007 UFO1YML088W 2007 nt10.19□□□□□ -0.78
SRD1P09007 CSM1YCR086W 573 nt10.19□□□□□ -0.78
SRD1P09007 ADH7YCR105W 1086 nt10.19□□□□□ -0.78
SRD1P09007 TRT2tT(CGU)K 72 nt10.19□□□□□ -0.78
SRD1P09007 RPM1RPM1 483 nt10.19□□□□□ -0.78
SRD1P09007 ZRT3YKL175W 1512 nt10.17□□□□□ -0.78
SRD1P09007 SSN3YPL042C 1668 nt10.17□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms