Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 DUT1YBR252W 444 nt9.35□□□□□ -0.91
CDC9P04819 PBP1YGR178C 2169 nt9.34□□□□□ -0.91
CDC9P04819 YCR087WYCR087W 516 nt9.34□□□□□ -0.91
CDC9P04819 YDR010CYDR010C 333 nt9.34□□□□□ -0.91
CDC9P04819 IRC24YIR036C 792 nt9.34□□□□□ -0.91
CDC9P04819 STR3YGL184C 1398 nt9.34□□□□□ -0.91
CDC9P04819 SHM2YLR058C 1410 nt9.32□□□□□ -0.92
CDC9P04819 RET2YFR051C 1641 nt9.31□□□□□ -0.92
CDC9P04819 SAM1YLR180W 1149 nt9.31□□□□□ -0.92
CDC9P04819 AIM45YPR004C 1035 nt9.3□□□□□ -0.92
CDC9P04819 CYT2YKL087C 675 nt9.27□□□□□ -0.93
CDC9P04819 PAB1YER165W 1734 nt9.27□□□□□ -0.93
CDC9P04819 NIT1YIL164C 600 nt9.26□□□□□ -0.93
CDC9P04819 SGT2YOR007C 1041 nt9.26□□□□□ -0.93
CDC9P04819 PHO89YBR296C 1725 nt9.25□□□□□ -0.93
CDC9P04819 AVT6YER119C 1347 nt9.25□□□□□ -0.93
CDC9P04819 RSC4YKR008W 1878 nt9.23□□□□□ -0.93
CDC9P04819 AQY2YLL052C 450 nt9.23□□□□□ -0.93
CDC9P04819 GOR1YNL274C 1053 nt9.23□□□□□ -0.93
CDC9P04819 GDH3YAL062W 1374 nt9.23□□□□□ -0.93
CDC9P04819 RTN2YDL204W 1182 nt9.19□□□□□ -0.94
CDC9P04819 MRP20YDR405W 792 nt9.16□□□□□ -0.94
CDC9P04819 MAS1YLR163C 1389 nt9.15□□□□□ -0.94
CDC9P04819 RAD51YER095W 1203 nt9.14□□□□□ -0.95
CDC9P04819 YLR111WYLR111W 333 nt9.14□□□□□ -0.95
CDC9P04819 COQ2YNR041C 1119 nt9.14□□□□□ -0.95
CDC9P04819 YAT1YAR035W 2064 nt9.08□□□□□ -0.96
CDC9P04819 SFA1YDL168W 1161 nt9.06□□□□□ -0.96
CDC9P04819 RPL4BYDR012W 1089 nt9.06□□□□□ -0.96
CDC9P04819 RPL4AYBR031W 1089 nt9.06□□□□□ -0.96
CDC9P04819 RAD23YEL037C 1197 nt9.05□□□□□ -0.96
CDC9P04819 PLB1YMR008C 1995 nt9.04□□□□□ -0.96
CDC9P04819 NBP35YGL091C 987 nt9.04□□□□□ -0.96
CDC9P04819 MCM5YLR274W 2328 nt9.04□□□□□ -0.96
CDC9P04819 CMP2YML057W 1815 nt9.03□□□□□ -0.96
CDC9P04819 YLR349WYLR349W 507 nt9.03□□□□□ -0.96
CDC9P04819 YLR437C-AYLR437C-A 228 nt9.02□□□□□ -0.97
CDC9P04819 YNR029CYNR029C 1290 nt9.02□□□□□ -0.97
CDC9P04819 STE4YOR212W 1272 nt9.02□□□□□ -0.97
CDC9P04819 ARP6YLR085C 1317 nt9.02□□□□□ -0.97
CDC9P04819 YCR102CYCR102C 1107 nt9.01□□□□□ -0.97
CDC9P04819 RPS14BYJL191W 417 nt9.01□□□□□ -0.97
CDC9P04819 GID7YCL039W 2238 nt8.99□□□□□ -0.97
CDC9P04819 YHL019W-AYHL019W-A 594 nt8.99□□□□□ -0.97
CDC9P04819 SDH5YOL071W 489 nt8.99□□□□□ -0.97
CDC9P04819 ESBP6YNL125C 2022 nt8.97□□□□□ -0.97
CDC9P04819 PRM5YIL117C 957 nt8.97□□□□□ -0.97
CDC9P04819 HIF1YLL022C 1158 nt8.97□□□□□ -0.97
CDC9P04819 YDR306CYDR306C 1437 nt8.95□□□□□ -0.98
CDC9P04819 RIB3YDR487C 627 nt8.94□□□□□ -0.98
CDC9P04819 FUN14YAL008W 597 nt8.94□□□□□ -0.98
CDC9P04819 UTH1YKR042W 1098 nt8.94□□□□□ -0.98
CDC9P04819 NAS6YGR232W 687 nt8.93□□□□□ -0.98
CDC9P04819 TSC10YBR265W 963 nt8.93□□□□□ -0.98
CDC9P04819 ALD4YOR374W 1560 nt8.93□□□□□ -0.98
CDC9P04819 HSL7YBR133C 2484 nt8.93□□□□□ -0.98
CDC9P04819 CAB5YDR196C 726 nt8.92□□□□□ -0.98
CDC9P04819 PUS7YOR243C 2031 nt8.91□□□□□ -0.98
CDC9P04819 ADH7YCR105W 1086 nt8.9□□□□□ -0.98
CDC9P04819 YGR012WYGR012W 1182 nt8.9□□□□□ -0.98
CDC9P04819 TIR3YIL011W 810 nt8.9□□□□□ -0.98
CDC9P04819 UTR1YJR049C 1593 nt8.9□□□□□ -0.99
CDC9P04819 PAU21YOR394W 495 nt8.89□□□□□ -0.99
CDC9P04819 YPL041CYPL041C 624 nt8.89□□□□□ -0.99
CDC9P04819 PAU22YPL282C 495 nt8.89□□□□□ -0.99
CDC9P04819 RFC1YOR217W 2586 nt8.89□□□□□ -0.99
CDC9P04819 RPC82YPR190C 1965 nt8.88□□□□□ -0.99
CDC9P04819 HIP1YGR191W 1812 nt8.87□□□□□ -0.99
CDC9P04819 YJL195CYJL195C 702 nt8.87□□□□□ -0.99
CDC9P04819 SHH4YLR164W 507 nt8.87□□□□□ -0.99
CDC9P04819 SPT20YOL148C 1815 nt8.87□□□□□ -0.99
CDC9P04819 PAU15YIR041W 375 nt8.86□□□□□ -0.99
CDC9P04819 YEL009C-AYEL009C-A 408 nt8.84□□□□□ -0.99
CDC9P04819 LSC2YGR244C 1284 nt8.84□□□□□ -0.99
CDC9P04819 YLR279WYLR279W 390 nt8.84□□□□□ -0.99
CDC9P04819 INA1YLR413W 2028 nt8.84□□□□□ -0.99
CDC9P04819 GAP1YKR039W 1809 nt8.84□□□□□ -0.99
CDC9P04819 TOM6YOR045W 186 nt8.83□□□□□ -1
CDC9P04819 NRT1YOR071C 1797 nt8.83□□□□□ -1
CDC9P04819 POM34YLR018C 900 nt8.82□□□□□ -1
CDC9P04819 YML089CYML089C 369 nt8.82□□□□□ -1
CDC9P04819 ADH1YOL086C 1047 nt8.82□□□□□ -1
CDC9P04819 PRO1YDR300C 1287 nt8.81□□□□□ -1
CDC9P04819 PEX2YJL210W 816 nt8.8□□□□□ -1
CDC9P04819 COG1YGL223C 1254 nt8.79□□□□□ -1
CDC9P04819 YPI1YFR003C 468 nt8.78□□□□□ -1
CDC9P04819 MET28YIR017C 564 nt8.78□□□□□ -1
CDC9P04819 RDN25-1RDN25-1 3396 nt8.78□□□□□ -1
CDC9P04819 RDN25-2RDN25-2 3396 nt8.78□□□□□ -1
CDC9P04819 HEM14YER014W 1620 nt8.77□□□□□ -1.01
CDC9P04819 YEL008WYEL008W 381 nt8.77□□□□□ -1.01
CDC9P04819 SAM35YHR083W 990 nt8.77□□□□□ -1.01
CDC9P04819 ARO7YPR060C 771 nt8.77□□□□□ -1.01
CDC9P04819 ZRT3YKL175W 1512 nt8.76□□□□□ -1.01
CDC9P04819 ESS1YJR017C 513 nt8.76□□□□□ -1.01
CDC9P04819 DTR1YBR180W 1719 nt8.75□□□□□ -1.01
CDC9P04819 TIF6YPR016C 738 nt8.75□□□□□ -1.01
CDC9P04819 FIT3YOR383C 615 nt8.74□□□□□ -1.01
CDC9P04819 YPL222C-AYPL222C-A 246 nt8.74□□□□□ -1.01
CDC9P04819 MSB4YOL112W 1479 nt8.74□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 49.3 ms