Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
CASQ2O14958 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CASQ2O14958 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CASQ2O14958 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASQ2O14958 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASQ2O14958 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CASQ2O14958 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CASQ2O14958 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CASQ2O14958 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CASQ2O14958 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CASQ2O14958 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CASQ2O14958 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASQ2O14958 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASQ2O14958 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASQ2O14958 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASQ2O14958 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.79■■□□□ 1.72
CASQ2O14958 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CASQ2O14958 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CASQ2O14958 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.77■■□□□ 1.72
CASQ2O14958 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CASQ2O14958 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CASQ2O14958 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CASQ2O14958 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CASQ2O14958 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CASQ2O14958 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CASQ2O14958 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.73■■□□□ 1.71
CASQ2O14958 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASQ2O14958 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASQ2O14958 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CASQ2O14958 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CASQ2O14958 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.7■■□□□ 1.7
CASQ2O14958 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASQ2O14958 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CASQ2O14958 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CASQ2O14958 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASQ2O14958 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASQ2O14958 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CASQ2O14958 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.68■■□□□ 1.7
CASQ2O14958 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.68■■□□□ 1.7
CASQ2O14958 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CASQ2O14958 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
CASQ2O14958 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.66■■□□□ 1.7
CASQ2O14958 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CASQ2O14958 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASQ2O14958 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASQ2O14958 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.65■■□□□ 1.7
CASQ2O14958 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.65■■□□□ 1.7
CASQ2O14958 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CASQ2O14958 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CASQ2O14958 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.64■■□□□ 1.7
CASQ2O14958 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASQ2O14958 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.64■■□□□ 1.69
CASQ2O14958 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASQ2O14958 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASQ2O14958 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
CASQ2O14958 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASQ2O14958 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASQ2O14958 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASQ2O14958 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASQ2O14958 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.59■■□□□ 1.69
CASQ2O14958 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CASQ2O14958 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASQ2O14958 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CASQ2O14958 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CASQ2O14958 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CASQ2O14958 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASQ2O14958 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
CASQ2O14958 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASQ2O14958 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASQ2O14958 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.56■■□□□ 1.68
CASQ2O14958 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.55■■□□□ 1.68
CASQ2O14958 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASQ2O14958 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASQ2O14958 ST7-AS1-201ENST00000456775 1889 ntBASIC25.55■■□□□ 1.68
CASQ2O14958 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASQ2O14958 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASQ2O14958 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.54■■□□□ 1.68
CASQ2O14958 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CASQ2O14958 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CASQ2O14958 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CASQ2O14958 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.53■■□□□ 1.68
CASQ2O14958 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CASQ2O14958 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CASQ2O14958 AC142086.6-201ENST00000621154 1765 ntBASIC25.51■■□□□ 1.67
CASQ2O14958 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CASQ2O14958 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.5■■□□□ 1.67
CASQ2O14958 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CASQ2O14958 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.49■■□□□ 1.67
CASQ2O14958 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASQ2O14958 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASQ2O14958 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CASQ2O14958 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CASQ2O14958 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CASQ2O14958 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CASQ2O14958 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CASQ2O14958 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CASQ2O14958 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CASQ2O14958 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CASQ2O14958 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CASQ2O14958 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms