Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-1A0A0B4J245 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAV12-1A0A0B4J245 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-1A0A0B4J245 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV12-1A0A0B4J245 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV12-1A0A0B4J245 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV12-1A0A0B4J245 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV12-1A0A0B4J245 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV12-1A0A0B4J245 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV12-1A0A0B4J245 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV12-1A0A0B4J245 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV12-1A0A0B4J245 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV12-1A0A0B4J245 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV12-1A0A0B4J245 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV12-1A0A0B4J245 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV12-1A0A0B4J245 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV12-1A0A0B4J245 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV12-1A0A0B4J245 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV12-1A0A0B4J245 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV12-1A0A0B4J245 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-1A0A0B4J245 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-1A0A0B4J245 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-1A0A0B4J245 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV12-1A0A0B4J245 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV12-1A0A0B4J245 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV12-1A0A0B4J245 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV12-1A0A0B4J245 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV12-1A0A0B4J245 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV12-1A0A0B4J245 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV12-1A0A0B4J245 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRAV12-1A0A0B4J245 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
TRAV12-1A0A0B4J245 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV12-1A0A0B4J245 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV12-1A0A0B4J245 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV12-1A0A0B4J245 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV12-1A0A0B4J245 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV12-1A0A0B4J245 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV12-1A0A0B4J245 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
TRAV12-1A0A0B4J245 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV12-1A0A0B4J245 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV12-1A0A0B4J245 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-1A0A0B4J245 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-1A0A0B4J245 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-1A0A0B4J245 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV12-1A0A0B4J245 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV12-1A0A0B4J245 AC142086.6-201ENST00000621154 1765 ntBASIC19.04■□□□□ 0.64
TRAV12-1A0A0B4J245 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV12-1A0A0B4J245 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV12-1A0A0B4J245 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV12-1A0A0B4J245 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV12-1A0A0B4J245 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV12-1A0A0B4J245 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV12-1A0A0B4J245 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV12-1A0A0B4J245 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV12-1A0A0B4J245 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19■□□□□ 0.63
TRAV12-1A0A0B4J245 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 ST7-AS1-201ENST00000456775 1889 ntBASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV12-1A0A0B4J245 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-1A0A0B4J245 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV12-1A0A0B4J245 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-1A0A0B4J245 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-1A0A0B4J245 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV12-1A0A0B4J245 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV12-1A0A0B4J245 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV12-1A0A0B4J245 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV12-1A0A0B4J245 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV12-1A0A0B4J245 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV12-1A0A0B4J245 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV12-1A0A0B4J245 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV12-1A0A0B4J245 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV12-1A0A0B4J245 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRAV12-1A0A0B4J245 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV12-1A0A0B4J245 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV12-1A0A0B4J245 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAV12-1A0A0B4J245 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-1A0A0B4J245 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRAV12-1A0A0B4J245 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV12-1A0A0B4J245 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV12-1A0A0B4J245 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRAV12-1A0A0B4J245 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV12-1A0A0B4J245 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRAV12-1A0A0B4J245 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV12-1A0A0B4J245 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV12-1A0A0B4J245 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.88■□□□□ 0.61
TRAV12-1A0A0B4J245 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV12-1A0A0B4J245 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV12-1A0A0B4J245 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV12-1A0A0B4J245 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV12-1A0A0B4J245 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-1A0A0B4J245 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-1A0A0B4J245 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRAV12-1A0A0B4J245 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRAV12-1A0A0B4J245 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV12-1A0A0B4J245 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
TRAV12-1A0A0B4J245 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms