Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MXRA5Y-201ENST00000420610 8000 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 TLR8-AS1-201ENST00000451564 1349 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC245297.1-201ENST00000313342 933 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 CLPSL1-201ENST00000373861 602 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PGAM1P4-201ENST00000397343 750 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AL357055.2-201ENST00000412567 434 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC000078.1-201ENST00000420617 682 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 DDTP1-201ENST00000443589 383 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 RN7SL681P-201ENST00000482763 292 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 NAT9-219ENST00000582524 573 ntTSL 4 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC125494.1-202ENST00000586338 723 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 AL445989.1-201ENST00000611641 1436 ntBASIC11.18□□□□□ -0.62
NPIPA3F8WFD2 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 PFN1P3-201ENST00000443612 402 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 PFN1P4-201ENST00000450970 402 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC022447.7-201ENST00000509629 435 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 SH3GL1P2-201ENST00000582245 1082 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AL353997.3-201ENST00000586597 589 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 MEG8_2.1-201ENST00000610604 122 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC130469.2-201ENST00000625112 1092 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 AC092471.1-202ENST00000637160 999 ntBASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 FOSL2-202ENST00000379619 5829 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
NPIPA3F8WFD2 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms