Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 FP565171.1-201ENST00000634373 1535 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC092135.1-201ENST00000623398 2059 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 PLEKHG5-203ENST00000377728 3613 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 AL009178.1-201ENST00000392115 1486 ntBASIC12.96□□□□□ -0.34
LMO3Q8TAP4 AC012313.5-201ENST00000594816 2517 ntBASIC12.96□□□□□ -0.34
LMO3Q8TAP4 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 KIR2DL4-201ENST00000345540 1447 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC12.96□□□□□ -0.34
LMO3Q8TAP4 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MST1R-215ENST00000621387 4449 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MOV10-204ENST00000413052 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 BTNL8-210ENST00000533815 1600 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MOCS1P1-201ENST00000564020 1612 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AC026797.1-201ENST00000624837 2869 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MSANTD4-201ENST00000301919 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 KRT34-201ENST00000394001 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MKL1-204ENST00000402630 747 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 ART2P-201ENST00000415521 822 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 FAU-202ENST00000434372 533 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AL132709.1-202ENST00000448840 588 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 FAM86JP-202ENST00000484500 988 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 HNRNPA3P13-201ENST00000512222 1122 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 INO80E-209ENST00000567254 625 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AC105036.3-204ENST00000568707 789 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 FGF11-205ENST00000575398 990 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AC018755.1-201ENST00000601315 1182 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AC092471.1-202ENST00000637160 999 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 SETMAR-201ENST00000358065 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 SERINC3-201ENST00000255175 1726 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AL133467.2-201ENST00000555032 1714 ntTSL 4 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 TUBD1-216ENST00000613721 2184 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 ICOS-201ENST00000316386 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 GHRL-202ENST00000335542 1425 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 AP000925.1-201ENST00000425960 1449 ntBASIC12.95□□□□□ -0.34
LMO3Q8TAP4 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LMO3Q8TAP4 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 GTF2A2-202ENST00000396060 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 TCF7-203ENST00000395023 2815 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 UQCRHL-201ENST00000483273 2180 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 SEMA4A-203ENST00000368284 2981 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 SDAD1P1-201ENST00000519902 3174 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 ADH7-204ENST00000476959 1325 ntTSL 2 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LMO3Q8TAP4 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms