Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 GPR61-207ENST00000618721 2823 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AL157902.2-201ENST00000623435 1492 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 LRRIQ4-201ENST00000340806 1827 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 SEPT3-202ENST00000396425 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 CCDC38-202ENST00000546386 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AL355607.2-201ENST00000563268 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 MS4A14-209ENST00000531787 2537 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ZC3HC1-209ENST00000481503 1741 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 LINC00880-201ENST00000471357 2018 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 PLP2-201ENST00000376322 620 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 MTND6P7-201ENST00000433237 524 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ATP6V0CP1-201ENST00000482495 618 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AL450346.2-201ENST00000495602 1024 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 OLR1-211ENST00000545927 1008 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ACTG1P16-201ENST00000564713 1082 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 KRT16P3-204ENST00000584759 681 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 LINC01198-206ENST00000595532 1125 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC008537.1-201ENST00000601627 575 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC018695.6-201ENST00000614011 534 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AL161669.3-201ENST00000618272 777 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 DUOXA1-208ENST00000558996 2684 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 AC010536.1-201ENST00000538868 2611 ntBASIC12.97□□□□□ -0.33
LMO3Q8TAP4 CD5-201ENST00000347785 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 CPNE8-203ENST00000538596 2875 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 CDKL3-201ENST00000265334 2130 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LMO3Q8TAP4 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 PARVA-201ENST00000334956 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 C19orf71-201ENST00000329493 674 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 FP885919.1-201ENST00000331259 1038 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 MPRIP-AS1-201ENST00000428367 1058 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 ARHGAP26-AS1-202ENST00000433595 978 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC005220.1-201ENST00000450473 884 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 RN7SL677P-201ENST00000466970 319 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC009078.2-201ENST00000489723 1254 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC090409.1-202ENST00000586949 653 ntTSL 2 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC063977.2-201ENST00000601996 421 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC005740.4-201ENST00000607378 957 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC245369.8-201ENST00000636589 306 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC12.96□□□□□ -0.33
LMO3Q8TAP4 AC127526.5-201ENST00000637148 1110 ntBASIC12.96□□□□□ -0.33
LMO3Q8TAP4 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms