Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 WNT4-201ENST00000290167 3845 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NPIPA3F8WFD2 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AC009549.1-201ENST00000603468 1686 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 PLP2-201ENST00000376322 620 ntTSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AL021407.3-201ENST00000407522 486 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AQP7P1-201ENST00000412626 1045 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AL590068.2-201ENST00000426067 378 ntTSL 3 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AC138392.1-201ENST00000427577 921 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 NUDT9P1-201ENST00000477230 745 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AL118557.1-201ENST00000554408 440 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 FOS-205ENST00000555242 629 ntTSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 MIR378I-201ENST00000582688 76 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 Metazoa_SRP.59-201ENST00000621376 277 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AC021683.4-201ENST00000623348 1099 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 IPO7-208ENST00000630083 195 ntTSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 JAML-201ENST00000292067 1959 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 PMS2CL-202ENST00000403974 1529 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 AC087164.2-201ENST00000624514 3130 ntBASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
NPIPA3F8WFD2 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ANKRD20A8P-201ENST00000432432 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 HNRNPA1P68-201ENST00000425806 979 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 AC073465.1-201ENST00000456671 464 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 AC112492.3-201ENST00000457557 1031 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 OR7E26P-201ENST00000502808 1006 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 DNM1P50-201ENST00000565767 508 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 RN7SL5P-201ENST00000581458 321 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 SIGLEC21P-201ENST00000598990 1010 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms