Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 OR2H2-201ENST00000383640 1514 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P04436 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
P04436 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC11.28□□□□□ -0.6
P04436 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P04436 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC11.28□□□□□ -0.6
P04436 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
P04436 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC11.28□□□□□ -0.6
P04436 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 NF2-204ENST00000361166 1837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
P04436 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04436 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC11.27□□□□□ -0.6
P04436 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.27□□□□□ -0.6
P04436 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P04436 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
P04436 BEND3P2-201ENST00000414425 2254 ntBASIC11.27□□□□□ -0.61
P04436 AC243964.3-201ENST00000623022 2028 ntBASIC11.27□□□□□ -0.61
P04436 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
P04436 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC11.27□□□□□ -0.61
P04436 CASP2-203ENST00000392925 616 ntTSL 3 BASIC11.27□□□□□ -0.61
P04436 PPP1R2P10-201ENST00000393023 595 ntBASIC11.27□□□□□ -0.61
P04436 TAC4-204ENST00000398154 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 CST13P-202ENST00000400563 1157 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 SLC48A1-202ENST00000442892 1024 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 AP005901.1-201ENST00000508721 1181 ntBASIC11.27□□□□□ -0.61
P04436 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC11.27□□□□□ -0.61
P04436 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 SMIM17-202ENST00000600547 573 ntTSL 4 BASIC11.27□□□□□ -0.61
P04436 AC254633.1-201ENST00000606790 345 ntBASIC11.27□□□□□ -0.61
P04436 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC11.27□□□□□ -0.61
P04436 AC012313.9-201ENST00000619318 633 ntBASIC11.27□□□□□ -0.61
P04436 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC11.27□□□□□ -0.61
P04436 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 AC092329.4-208ENST00000640354 562 ntTSL 4 BASIC11.27□□□□□ -0.61
P04436 FAM98A-202ENST00000403368 2818 ntTSL 2 BASIC11.27□□□□□ -0.61
P04436 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC11.27□□□□□ -0.61
P04436 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.27□□□□□ -0.61
P04436 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.27□□□□□ -0.61
P04436 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.27□□□□□ -0.61
P04436 AL590434.1-201ENST00000641402 1886 ntBASIC11.27□□□□□ -0.61
P04436 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
P04436 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.27□□□□□ -0.61
P04436 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P04436 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC11.27□□□□□ -0.61
P04436 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
P04436 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 AL009178.1-201ENST00000392115 1486 ntBASIC11.26□□□□□ -0.61
P04436 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC11.26□□□□□ -0.61
P04436 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
P04436 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 POM121L7P-201ENST00000329949 2404 ntBASIC11.26□□□□□ -0.61
P04436 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 TMEM253-201ENST00000418511 1526 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
P04436 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
P04436 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 KLRK1-201ENST00000240618 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
P04436 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 NDUFAF3-201ENST00000326912 705 ntTSL 2 BASIC11.26□□□□□ -0.61
P04436 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P04436 AC005587.1-201ENST00000401879 592 ntBASIC11.26□□□□□ -0.61
P04436 AL935212.2-201ENST00000419207 718 ntTSL 5 BASIC11.26□□□□□ -0.61
P04436 AL354714.2-201ENST00000425270 1097 ntBASIC11.26□□□□□ -0.61
P04436 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms