Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 SCN5A-202ENST00000333535 8456 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AL353593.1-201ENST00000602517 3955 ntBASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
NPIPA3F8WFD2 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC243964.3-201ENST00000623022 2028 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AREG-201ENST00000395748 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 POLR3DP1-201ENST00000398689 1176 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 HNRNPA1P73-201ENST00000446472 928 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 MTND6P4-201ENST00000506002 522 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AKR1B1P3-201ENST00000525311 588 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AP000911.1-204ENST00000533091 571 ntTSL 4 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 ALG10-202ENST00000538927 571 ntTSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC074052.1-201ENST00000567734 456 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 ZNF226-212ENST00000588795 641 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 PSME2-217ENST00000615264 874 ntTSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AL353626.2-201ENST00000615372 130 ntBASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 PSME2-218ENST00000630027 185 ntTSL 3 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC109635.4-201ENST00000636653 1005 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AL157838.1-201ENST00000424252 2502 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC11.32□□□□□ -0.6
NPIPA3F8WFD2 AC007614.5-201ENST00000623424 8892 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 DGKZP1-201ENST00000378718 2776 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 AC122688.3-201ENST00000623804 3467 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 CICP19-201ENST00000632944 2357 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 FOXD2-AS1-201ENST00000445551 2509 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 BPIFB9P-201ENST00000246222 1178 ntBASIC11.31□□□□□ -0.6
NPIPA3F8WFD2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms