Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 AL353803.4-201ENST00000565882 1934 ntBASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIT1Q9Y3P8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 MKRN4P-201ENST00000444706 1521 ntBASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIT1Q9Y3P8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 DUSP5P2-201ENST00000426873 1033 ntBASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 AC013268.1-206ENST00000638368 961 ntBASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 AC112229.1-201ENST00000639295 961 ntBASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIT1Q9Y3P8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
SIT1Q9Y3P8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.95■■□□□ 1.1
SIT1Q9Y3P8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.94■■□□□ 1.1
SIT1Q9Y3P8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 AC010141.2-201ENST00000452426 721 ntBASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 AC098590.1-201ENST00000468126 897 ntBASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.93■■□□□ 1.1
SIT1Q9Y3P8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 TERF1P5-201ENST00000477545 1207 ntBASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 AC138907.5-202ENST00000569484 235 ntBASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SIT1Q9Y3P8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIT1Q9Y3P8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms