Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
RTCBQ9Y3I0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.65■■■□□ 2.02
RTCBQ9Y3I0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
RTCBQ9Y3I0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.65■■■□□ 2.02
RTCBQ9Y3I0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.65■■■□□ 2.02
RTCBQ9Y3I0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.65■■■□□ 2.02
RTCBQ9Y3I0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
RTCBQ9Y3I0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTCBQ9Y3I0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
RTCBQ9Y3I0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTCBQ9Y3I0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
RTCBQ9Y3I0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RTCBQ9Y3I0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RTCBQ9Y3I0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
RTCBQ9Y3I0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 LINC00543-201ENST00000567234 1845 ntBASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 AC098934.4-201ENST00000564127 592 ntBASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
RTCBQ9Y3I0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RTCBQ9Y3I0 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 AC008687.6-201ENST00000596318 630 ntBASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 AC010536.3-201ENST00000620306 533 ntBASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RTCBQ9Y3I0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 AC093827.2-201ENST00000512654 315 ntBASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 AC055733.4-201ENST00000638462 1354 ntBASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
RTCBQ9Y3I0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.59■■■□□ 2.01
RTCBQ9Y3I0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 AC004812.2-201ENST00000611079 2094 ntBASIC27.58■■■□□ 2.01
RTCBQ9Y3I0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.58■■■□□ 2
RTCBQ9Y3I0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.57■■■□□ 2
RTCBQ9Y3I0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.57■■■□□ 2
RTCBQ9Y3I0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.57■■■□□ 2
RTCBQ9Y3I0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTCBQ9Y3I0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.57■■■□□ 2
RTCBQ9Y3I0 POU5F1P3-201ENST00000428824 1078 ntBASIC27.57■■■□□ 2
RTCBQ9Y3I0 KRT18P20-201ENST00000548986 1279 ntBASIC27.57■■■□□ 2
RTCBQ9Y3I0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.57■■■□□ 2
RTCBQ9Y3I0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC27.57■■■□□ 2
RTCBQ9Y3I0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
RTCBQ9Y3I0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.57■■■□□ 2
RTCBQ9Y3I0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.56■■■□□ 2
RTCBQ9Y3I0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.56■■■□□ 2
RTCBQ9Y3I0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTCBQ9Y3I0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.56■■■□□ 2
RTCBQ9Y3I0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
RTCBQ9Y3I0 AC010141.2-201ENST00000452426 721 ntBASIC27.56■■■□□ 2
RTCBQ9Y3I0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.56■■■□□ 2
RTCBQ9Y3I0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.56■■■□□ 2
RTCBQ9Y3I0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RTCBQ9Y3I0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
RTCBQ9Y3I0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
RTCBQ9Y3I0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
RTCBQ9Y3I0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTCBQ9Y3I0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RTCBQ9Y3I0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.55■■■□□ 2
RTCBQ9Y3I0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms