Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 KRT18P61-201ENST00000585825 1298 ntBASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1Q9Y2A7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1Q9Y2A7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1Q9Y2A7 AC005224.4-201ENST00000583262 1652 ntBASIC21.73■■□□□ 1.07
NCKAP1Q9Y2A7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1Q9Y2A7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.73■■□□□ 1.07
NCKAP1Q9Y2A7 BID-214ENST00000617586 542 ntTSL 5 BASIC21.73■■□□□ 1.07
NCKAP1Q9Y2A7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1Q9Y2A7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NCKAP1Q9Y2A7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 ID1-201ENST00000376105 1233 ntBASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 KRT18P11-201ENST00000435214 1283 ntBASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 LINC01960-201ENST00000563759 1884 ntBASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1Q9Y2A7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 AC079089.2-201ENST00000531211 1277 ntBASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKAP1Q9Y2A7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.7■■□□□ 1.07
NCKAP1Q9Y2A7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 ESRRAP2-201ENST00000418437 1549 ntBASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1Q9Y2A7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1Q9Y2A7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms