Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC33.8■■■■□ 3
CDK11AQ9UQ88 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CDK11AQ9UQ88 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC33.8■■■■□ 3
CDK11AQ9UQ88 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC33.8■■■■□ 3
CDK11AQ9UQ88 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC33.8■■■■□ 3
CDK11AQ9UQ88 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
CDK11AQ9UQ88 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC33.79■■■■□ 3
CDK11AQ9UQ88 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC33.79■■■■□ 3
CDK11AQ9UQ88 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC33.79■■■■□ 3
CDK11AQ9UQ88 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC33.79■■■■□ 3
CDK11AQ9UQ88 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CDK11AQ9UQ88 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC33.79■■■■□ 3
CDK11AQ9UQ88 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CDK11AQ9UQ88 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC33.78■■■■□ 3
CDK11AQ9UQ88 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CDK11AQ9UQ88 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.78■■■■□ 3
CDK11AQ9UQ88 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
CDK11AQ9UQ88 PARP1-210ENST00000629232 477 ntTSL 5 BASIC33.78■■■■□ 3
CDK11AQ9UQ88 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.78■■■■□ 3
CDK11AQ9UQ88 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.78■■■■□ 3
CDK11AQ9UQ88 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC33.78■■■■□ 3
CDK11AQ9UQ88 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CDK11AQ9UQ88 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC33.77■■■■□ 3
CDK11AQ9UQ88 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC33.77■■■■□ 3
CDK11AQ9UQ88 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC33.77■■■■□ 3
CDK11AQ9UQ88 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.77■■■■□ 3
CDK11AQ9UQ88 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CDK11AQ9UQ88 AP001160.3-201ENST00000601484 763 ntBASIC33.77■■■■□ 3
CDK11AQ9UQ88 MYCNOS-205ENST00000641950 531 ntBASIC33.77■■■■□ 3
CDK11AQ9UQ88 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC33.77■■■■□ 3
CDK11AQ9UQ88 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
CDK11AQ9UQ88 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CDK11AQ9UQ88 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
CDK11AQ9UQ88 AC055733.4-201ENST00000638462 1354 ntBASIC33.76■■■■□ 3
CDK11AQ9UQ88 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
CDK11AQ9UQ88 CD99P1-205ENST00000527459 561 ntBASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 SLC7A5P2-201ENST00000553010 536 ntBASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 AC005181.1-201ENST00000604782 1256 ntBASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
CDK11AQ9UQ88 PXK-203ENST00000383715 1756 ntTSL 5 BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 OAS3-207ENST00000551007 998 ntTSL 2 BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC33.75■■■□□ 2.99
CDK11AQ9UQ88 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 GUSBP6-202ENST00000438529 1198 ntBASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 APTR-205ENST00000447009 902 ntTSL 2 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 TMEM191A-211ENST00000637163 1067 ntBASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC33.74■■■□□ 2.99
CDK11AQ9UQ88 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 METTL15-202ENST00000403099 795 ntTSL 5 BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC33.73■■■□□ 2.99
CDK11AQ9UQ88 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
CDK11AQ9UQ88 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 BRI3-207ENST00000539286 699 ntTSL 2 BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC33.71■■■□□ 2.99
CDK11AQ9UQ88 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 SERP1-208ENST00000491660 830 ntTSL 2 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC33.7■■■□□ 2.99
CDK11AQ9UQ88 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC33.7■■■□□ 2.98
CDK11AQ9UQ88 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
CDK11AQ9UQ88 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
CDK11AQ9UQ88 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
CDK11AQ9UQ88 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
CDK11AQ9UQ88 AC079089.2-201ENST00000531211 1277 ntBASIC33.69■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms