Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 AL137060.1-201ENST00000618151 2648 ntBASIC19.48■□□□□ 0.71
ZNF346Q9UL40 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF346Q9UL40 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 MIR4466-201ENST00000606121 54 ntBASIC19.47■□□□□ 0.71
ZNF346Q9UL40 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF346Q9UL40 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF346Q9UL40 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF346Q9UL40 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 AL136116.3-201ENST00000402907 1138 ntBASIC19.44■□□□□ 0.7
ZNF346Q9UL40 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF346Q9UL40 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF346Q9UL40 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.42■□□□□ 0.7
ZNF346Q9UL40 OR2I1P-207ENST00000453522 948 ntBASIC19.42■□□□□ 0.7
ZNF346Q9UL40 AC079089.2-201ENST00000531211 1277 ntBASIC19.42■□□□□ 0.7
ZNF346Q9UL40 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF346Q9UL40 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms